Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02138 ATGATTTCTGTCTTCTCCACCAAGGCCACAAACCAAAGAAAATCTCAATTCTCCATCACAGAGGATCAGTTCCTTGTCCCTGTTAATGGGATGATGAGACCCTTTGAGTTTGGGTTCAGTGATAACCCGTTAATTCTTCCACCTGATCTAAACTTTGCTCAGAACCATGTTTCCTTTGCCCCCGATGAGGAGTCTCCGTTGGATGAGATTGATTTTTCTGCCACTGTCTTACGCTACATAAACCAAATGCTTATGGAAGAGGACTTGGAGGCGAAGTCGTGTATGTTTCATGATTCCTTGGCTCTCCAAGCTGCTGAGAAATCATTCTATGAGGCCATTGGTGAGACACACCCTTCTTCAGTAAAAACCTATCACAACGTGGACAGCCCTGAGGATAGTAGTTTCAGTGATTATGGCAGCAGTGGTACAACCACTAGCACTACTAACTCGATTGATTCCCATTGGAATAACGTTGATCTTACAGACTATAAGCCTTCCATACTGCAAACAACTTTTCCCACTGACTTTGTTTTCCAGGCCAGTTCAATCCAATCTTCCATGAACACCACAAGCAACTTCGGTGTTACCGATAGAGGATTCTTGCCAACGGCTGGATTTTTGGATCCAACCTTGTTTAGCAAGAGTGAGTCTGTACTGCAATTTGAGAGGGGTGTGGAAGAAGCCAATAAGTTCCTACCTAAAGTGAATCCTTTGGTTATTGACTTGGAGAACCCCACTTTTAGGAAGGTTCCTCCTCTGCAGGAGGAAATTAAGGCAGAGAGAGATGAAATTTCTGCGGAGTTAAGAGGAAGGAAGAATCACGGGCGGGAAGATGAAGAAGCAGATTCGCAAGATGGGAGAAGCAACAAGCAATCTGCTGTCTACATTGATGACAGTGAGATATCAGAATTGCTTGATAAGGTTCTGCTGGGCACTGGATGCAGAAAGGAGCCAGCTCCTTTGTGTATTTGTTACGCAGACCTTCCTAATGGAGCATCCTCGAGTGCACAGAAGAAATTAGAAGAAACAAACAAGTCTGGTGGTGGGAAGAGCCGTGTTAAGAAGCAAGGAAACACAAAAGGAGTTGTGGATCTGAGGACATTGTTGATTCTGTGTGCACAAGCTGTTTCTTCTGATGATCGTGTGTCTGCTAATGAATTGCTGAAGCAGATAAGGCAACATACTTCTCCTTTGGGTGATGGGACTCAGAGGTTGGCCCATTGCTTTGCAAATGCTCTTGAAGCACGCTTGGCTGGGACAGGAACTCAGATGTATACTGCTTTATCACACAAAAGAACCTCTGCAGCAGACATGGTGAAAGCTTACCAAATGTATATTTCAGCCTGTCCATTCAAGAAGCTATCAATCATTTTTGCAAACCATACAATTCTGCAGCTAGCCATGGAAGTTGAATCTCTTCACATTATAGACTTTGGCATCCGTTATGGCTTCCAATGGCCTGCTCTTATTTATCGTCTATCAAAAAGACTCGGTGGGCCTCCCAAGCTTCGGATTACAGGGATAGAACTCCCACAACCTGGTTTCAGGCCAGCAGAGAGAGTCCAGCAGACGGGGCTGCGCCTTAAAAGATATTGTGATCGCTTTAAAGTTCCATTCGAGTTCAATGCCATTGCACAGAAATGGGAAACCATCAAAGTTGAGGACTTGAAGATAAAGGAGAATGAACTTCTTGCAGTGAATTCTATGTTTAGGTTTCAGAATCTACTTGATGAGACAGTTGTGTTGAACAGTCCCCGTGATGCCGTTTTAAGTTTAATAAGGAAGGCAAATCCCAGTATTTTTATACAAGGTACTGTCAATGGAAGCTACAATGCTCCATTCTTTGTAACACGGTTCCGGGAGGCCCTTTTCCATTATTCTACGTTGTTTGATGTGCTTGACACTAATGTCAGTCGTGAAGATCCAATGAGGTTGATGTTTGAGAAAGAGTTCTTTGGTCGGAGAGTAATGAATGCTTTAGCTTGTGAGGGCTGTGAGAGGGTTGAGAGGCCCGAGACATACAAGCAATGGCAGGTTAGGAACACCAGAGCTGGATTTAGGCAACTTCCCCTGGATAAACATCTCATCAACAAATTAAGATGCAAGTTGAAAGATATATATCACAGTGATTTCATGCTTCTTGAAGATGCAAACTTTATGCTGCAAGGTTGGAAAGGCAGAGTAGTTTATGCTTCATCTTGTTGGGTGCCTGCATAG 2217 0.4371 MISVFSTKATNQRKSQFSITEDQFLVPVNGMMRPFEFGFSDNPLILPPDLNFAQNHVSFAPDEESPLDEIDFSATVLRYINQMLMEEDLEAKSCMFHDSLALQAAEKSFYEAIGETHPSSVKTYHNVDSPEDSSFSDYGSSGTTTSTTNSIDSHWNNVDLTDYKPSILQTTFPTDFVFQASSIQSSMNTTSNFGVTDRGFLPTAGFLDPTLFSKSESVLQFERGVEEANKFLPKVNPLVIDLENPTFRKVPPLQEEIKAERDEISAELRGRKNHGREDEEADSQDGRSNKQSAVYIDDSEISELLDKVLLGTGCRKEPAPLCICYADLPNGASSSAQKKLEETNKSGGGKSRVKKQGNTKGVVDLRTLLILCAQAVSSDDRVSANELLKQIRQHTSPLGDGTQRLAHCFANALEARLAGTGTQMYTALSHKRTSAADMVKAYQMYISACPFKKLSIIFANHTILQLAMEVESLHIIDFGIRYGFQWPALIYRLSKRLGGPPKLRITGIELPQPGFRPAERVQQTGLRLKRYCDRFKVPFEFNAIAQKWETIKVEDLKIKENELLAVNSMFRFQNLLDETVVLNSPRDAVLSLIRKANPSIFIQGTVNGSYNAPFFVTRFREALFHYSTLFDVLDTNVSREDPMRLMFEKEFFGRRVMNALACEGCERVERPETYKQWQVRNTRAGFRQLPLDKHLINKLRCKLKDIYHSDFMLLEDANFMLQGWKGRVVYASSCWVPA 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02138 738 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 289 729 IPR005202 -
Viun11g02138 738 ProSiteProfiles GRAS family profile. 356 736 IPR005202 -
Viun11g02138 738 MobiDBLite consensus disorder prediction 266 286 - -
Viun11g02138 738 MobiDBLite consensus disorder prediction 266 293 - -
Viun11g02138 738 MobiDBLite consensus disorder prediction 336 357 - -
Viun11g02138 738 Pfam GRAS domain family 365 735 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02138 Viun-Chr11 36538127 36541513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02138 76 738 GRAS Transcription Factor Family AT1G07530 54.871 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun11g02138 GRAS 1.5e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02138 - - gmx:100815586 1190.25