Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02129 ATGGGAGTTTGTTTGAGCACCAAAACTAAAACTGGGTTAAACTCAAAGCATGTGAGTGCCGATGCCAAAGATCTCAGTAGCAGAATTAGTAAGGTCTCAGAGGTTTCGGTGCCTCAGAGTCTTGAGAGTGAGGGTGAGATGTTGAATTCATCCAATCTGAAGAGCTTTAGTTTGACAGAACTTACAGCTGCCACAAGAAATTTCCGTAAGGACAGTGTCTTAGGAGAGGGTGGTTTTGGTTCAGTTTTTAAGGGTTGGATTGATGATAACTCACTCTCTGCAACCAATCCTGGCACGGGGATTGTTGTTGCTGTCAAAAGACTTAGCCAGGATAGCTTCCAAGGTCACGAAGAGTGGTTGGCAAGGCGCAGTATAACTCAGGAAGCAAGTCTCAAGGATGAAGTCAACTGTCTAGGACAGCTTTCTCATCCTCATCTTGTGAAATTAATTGGATATTGCTTTGAAGATAGAGACCGTCTTCTGGTCTATGAATTTATGCCTCGTGGTAGCTTGGAGAATCACTTGTTCATGAGAGGTTCATATTTTCAACCTCTTTCTTGGGGCCTGCGTTTGAAAGTTGCTCTTGGTGCTGCCAAAGGGCTTGCATTTCTCCACAGTGCTGAAACAAAAGTCATATATAAAGATTTCAAGACCTCAAATGTGTTGTTGGATTCGCATTACAATGCAAAGCTCGCTGATTTAGGGCTCTCAAAAGAAGCACCTACACTTGACAAAAGTAGTGTCTCCACTAGAGTAATGGGAACCTATGGATATGCAGCTCCAGAATATCTAGCCACAGGTCATGTGAGTGCTAAGAGTGATGTGTTCAGTTTTGGAGTAGTTATGGTAGAACTGTTATCTGGTAGGAGGGCTGTGGACAAGAACAGACCATCAGGGCAGCAGAATTTGGTGGAATGGGCAAAGCCATACATGGCAAACAAGAGAAAGCTTCTGCGTGTGTTGGATAACCGTCTTGAAGGACAATATGACATAGATGAGGCTTTTAAGGTTGCTACTCTCTGTCTGCAATGCCTTGCAACAGAATCCAAGTTGAGACCAAACATGCACGAAGTTGTCACAGATTTGGAGCAGCTGCAGGTTCCTCATGTGCATCATAATCGTTCTGTGAATACCTCACGTGGTCGTAGGAAAAGTGCTGATGATTTAACCAATGGTAGAAGCGTTAAAGCTTCAGTTTCCCCTCTCTCACATGACACTGCAAATAAACGTCCTTGA 1236 0.4377 MGVCLSTKTKTGLNSKHVSADAKDLSSRISKVSEVSVPQSLESEGEMLNSSNLKSFSLTELTAATRNFRKDSVLGEGGFGSVFKGWIDDNSLSATNPGTGIVVAVKRLSQDSFQGHEEWLARRSITQEASLKDEVNCLGQLSHPHLVKLIGYCFEDRDRLLVYEFMPRGSLENHLFMRGSYFQPLSWGLRLKVALGAAKGLAFLHSAETKVIYKDFKTSNVLLDSHYNAKLADLGLSKEAPTLDKSSVSTRVMGTYGYAAPEYLATGHVSAKSDVFSFGVVMVELLSGRRAVDKNRPSGQQNLVEWAKPYMANKRKLLRVLDNRLEGQYDIDEAFKVATLCLQCLATESKLRPNMHEVVTDLEQLQVPHVHHNRSVNTSRGRRKSADDLTNGRSVKASVSPLSHDTANKRP 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02129 411 PANTHER OS01G0588500 PROTEIN-RELATED 32 366 - -
Viun11g02129 411 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 166 376 - -
Viun11g02129 411 MobiDBLite consensus disorder prediction 369 411 - -
Viun11g02129 411 SUPERFAMILY Protein kinase-like (PK-like) 52 366 IPR011009 -
Viun11g02129 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Viun11g02129 411 Gene3D Phosphorylase Kinase; domain 1 43 165 - -
Viun11g02129 411 Pfam Protein tyrosine and serine/threonine kinase 71 362 IPR001245 GO:0004672|GO:0006468
Viun11g02129 411 ProSitePatterns Protein kinases ATP-binding region signature. 74 106 IPR017441 GO:0005524
Viun11g02129 411 FunFam Serine/threonine-protein kinase BIK1 35 165 - -
Viun11g02129 411 ProSiteProfiles Protein kinase domain profile. 68 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02129 411 MobiDBLite consensus disorder prediction 391 405 - -
Viun11g02129 411 Gene3D Transferase(Phosphotransferase) domain 1 166 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02129 Viun-Chr11 36488325 36491412 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02129 42 362 Glycoside Hydrolase AT3G07070 45.846 1.79e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Viun11g02129 PK_Tyr_Ser-Thr 2.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02129 - - vun:114169806 808.135