Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02128 ATGGCCATACCCACCTTCTTTAGTCACTTCAACTTCTTTATCTCTTTGTCTTTTCTAATCCTTCCAAGTTTTTATCTGAAACTTTGGTCAACTTGCTCTTTAACTTATGAATGGTCTTTCTGTTCTCTCTCTAGGGACCACACACAAGTTAACACTAATAATAAGGTCTACATGTCAGCAAACTTGTGTTTCTCCCTTCCTGCATCCCCTGTAGAGGCTAGCTGCAACAAGGCTCAAGGAATTAGTGTTCCTTCTATCATGGGAGTTTGTTTGAGCACCAAAACTAAAACTGGGTTAAACTCAAAGCATGTGAGTGCCGATGCCAAAGATCTCAGTAGCAGAATTAGTAAGGTCTCAGAGGTTTCGGTGCCTCAGAGTCTTGAGAGTGAGGGTGAGATGTTGAATTCATCCAATCTGAAGAGCTTTAGTTTGACAGAACTTACAGCTGCCACAAGAAATTTCCGTAAGGACAGTGTCTTAGGAGAGGGTGGTTTTGGTTCAGTTTTTAAGGGTTGGATTGATGATAACTCACTCTCTGCAACCAATCCTGGCACGGGGATTGTTGTTGCTGTCAAAAGACTTAGCCAGGATAGCTTCCAAGGTCACGAAGAGTGGTTGGCAAGGCGCAGTATAACTCAGGAAGCAAGTCTCAAGGATGAAGTCAACTGTCTAGGACAGCTTTCTCATCCTCATCTTGTGAAATTAATTGGATATTGCTTTGAAGATAGAGACCGTCTTCTGGTCTATGAATTTATGCCTCGTGGTAGCTTGGAGAATCACTTGTTCATGAGAGGTTCATATTTTCAACCTCTTTCTTGGGGCCTGCGTTTGAAAGTTGCTCTTGGTGCTGCCAAAGGGCTTGCATTTCTCCACAGTGCTGAAACAAAAGTCATATATAAAGATTTCAAGACCTCAAATGTGTTGTTGGATTCGCATTACAATGCAAAGCTCGCTGATTTAGGGCTCTCAAAAGAAGCACCTACACTTGACAAAAGTAGTGTCTCCACTAGAGTAATGGGAACCTATGGATATGCAGCTCCAGAATATCTAGCCACAGGTCATGTGAGTGCTAAGAGTGATGTGTTCAGTTTTGGAGTAGTTATGGTAGAACTGTTATCTGGTAGGAGGGCTGTGGACAAGAACAGACCATCAGGGCAGCAGAATTTGGTGGAATGGGCAAAGCCATACATGGCAAACAAGAGAAAGCTTCTGCGTGTGTTGGATAACCGTCTTGAAGGACAATATGACATAGATGAGGCTTTTAAGGTTGCTACTCTCTGTCTGCAATGCCTTGCAACAGAATCCAAGTTGAGACCAAACATGCACGAAGTTGTCACAGATTTGGAGCAGCTGCAGGTTCCTCATGTGCATCATAATCGTTCTGTGAATACCTCACGTGGTCGTAGGAAAAGTGCTGATGATTTAACCAATGGTAGAAGCGTTAAAGCTTCAGTTTCCCCTCTCTCACATGACACTGCAAATAAACGTCCTTGA 1494 0.4311 MAIPTFFSHFNFFISLSFLILPSFYLKLWSTCSLTYEWSFCSLSRDHTQVNTNNKVYMSANLCFSLPASPVEASCNKAQGISVPSIMGVCLSTKTKTGLNSKHVSADAKDLSSRISKVSEVSVPQSLESEGEMLNSSNLKSFSLTELTAATRNFRKDSVLGEGGFGSVFKGWIDDNSLSATNPGTGIVVAVKRLSQDSFQGHEEWLARRSITQEASLKDEVNCLGQLSHPHLVKLIGYCFEDRDRLLVYEFMPRGSLENHLFMRGSYFQPLSWGLRLKVALGAAKGLAFLHSAETKVIYKDFKTSNVLLDSHYNAKLADLGLSKEAPTLDKSSVSTRVMGTYGYAAPEYLATGHVSAKSDVFSFGVVMVELLSGRRAVDKNRPSGQQNLVEWAKPYMANKRKLLRVLDNRLEGQYDIDEAFKVATLCLQCLATESKLRPNMHEVVTDLEQLQVPHVHHNRSVNTSRGRRKSADDLTNGRSVKASVSPLSHDTANKRP 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02128 497 SUPERFAMILY Protein kinase-like (PK-like) 138 451 IPR011009 -
Viun11g02128 497 Gene3D Transferase(Phosphotransferase) domain 1 252 472 - -
Viun11g02128 497 MobiDBLite consensus disorder prediction 455 497 - -
Viun11g02128 497 Pfam Protein tyrosine and serine/threonine kinase 157 448 IPR001245 GO:0004672|GO:0006468
Viun11g02128 497 ProSiteProfiles Protein kinase domain profile. 154 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02128 497 FunFam Serine/threonine-protein kinase BIK1 121 251 - -
Viun11g02128 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 297 309 IPR008271 GO:0004672|GO:0006468
Viun11g02128 497 ProSitePatterns Protein kinases ATP-binding region signature. 160 192 IPR017441 GO:0005524
Viun11g02128 497 PANTHER OS01G0588500 PROTEIN-RELATED 112 452 - -
Viun11g02128 497 MobiDBLite consensus disorder prediction 477 491 - -
Viun11g02128 497 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 252 462 - -
Viun11g02128 497 Gene3D Phosphorylase Kinase; domain 1 129 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02128 Viun-Chr11 36488320 36491412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02128 128 448 Glycoside Hydrolase AT3G07070 45.846 4.73e-93 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Viun11g02128 PK_Tyr_Ser-Thr 4.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02128 - - vun:114169806 963.755