Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02126 ATGGGAAACGGCATAGGGAAGTTAACGGTGTGCTTCACCGGAAATAACGGTGGGGGACGTCGGAAGCAGGATATATCCATTTTAATAACGGAGCCTCTGGACGAGGGTTTGGGTCACTCTTTCTGCTACGTTAGACCCGACCCGACCCGGATATCGTCATCGAAGGTGCACTCGGAGGAAACAACGACGTTCAGAACAATCTCTGGCGCTTCGGTGAGCGCTAACACATCCACGCCGTTATCGACGGCGTTCGTGGACTTGTACTCATACGGTTGCATAGACCGAGCGGCGGCTTTCGAGAGTTCAACGTCGTTCGCGTCGCTTCCTCTGCAACCGATTCCGCGGAACCTGGTGAACTCGGGGCCATTCTCGGGGAACCTGGGCGGTGGTGGGTTTCCGGGGTCGGGCCCGCTGGAGAGGGGTTTCATGTCGGGCCCCATCGAGCGCGGGTTCATGTCGGGGCCCATCGATCGTGGGCTTTTTTCGGGGCCGATGGAGAGGGAGGGAAACGGATCGGATCATTTCCCGAGAAGCTTCTCGCACGGAGGGATGGGTTTAGGGTTGGGATTGGGTTTGAGAGTGAGAACGAGGAAGGGTCGGTGGATTCGTGTTTTGCAGAGGGCGATTTCGAAGACTCTCTCTCGGGGGCAGAACTCGGTTGTGGCTCCGATCAAAGGAGTGGTTGTAAAGGAGCCGGAGTGGATGGTGGCTGCGGCGGAGAAGCATAATGAGAATCTGAGTGTGAATTTGAGCAGTGAGGGGAGCTTGGAGGACGATGAATCTATGGAGAGTCAGAATCTTCAGTGGGCTCAGGGGAAAGCAGGGGAAGATCGTGTCCATGTTGTTGTGTCTGAGGAACACGGATGGGTTTTCGTGGGGATCTATGACGGTTTCAACGGACCCGATGCTCCCGATTACCTTCTCTCGAATCTCTACACGGCGGTGCACAAGGAGCTGAAAGGGTTGTTGTGGGATGATGGGTCTGCCCCGGAAAATTCGACGCCTAAAGAGGAGGTGTTGCGGGATGTCACAGACGTTGCAGATGCAGTAGATGCATGCTCTCACTGTGTTGAACATGAAAATAGTAACTGTAATAAGAGTACTAGTAAGAAAGGTAGGAATTCGAGGAACAAGTACAAAGGTGCTGCGAATAAGTGGGAGGAGAATCAACGGAGGTGGAAGTGTGAGTGGGACAGGGAGAGGTTAGAGCTTGATCGGAGATTGAAGGAGCAACTGAATTCAAGCCGATCAGGATGTGGTGGAGCAGCAAGTTCTATTAATCATGCGGATGTTTTGGAAGCTCTTTCACGGGCTCTGAGGAAGACTGAGGAGTCTTACCTTGATGTTGCGGATAAGATGGTGATGGAGAATCCTGAACTTGCCTTGATGGGTTCTTGTGTTCTTGTGATGTTGATGAAGGGGGAGGATGTTTACGTCATGAATGTGGGGGATAGCCGCGCTGTGCTGGCTCAGAAGGCTGAGCCTGATTATTGGCTCGGCAAGATCAGACAGGACTTGGAGAGGATCAATGAGGAGACGATGAATGATCTTGAATCTTGGGATGTTGATAACTCCAACTTGGTTCCAAGTCTTAGTGCGATTCAGCTCACAAAAGATCATAGCACTAGTGTTGAAGAAGAAATCCAGAGAATTAAAAAGGAGCACCCGGATGATCCGTGTGCTGTTGTAAATGACCGTGTTAAGGGTTCTCTCAAGGTTACACGAGCATTTGGTGCCGGGTTTCTCAAACAGCCCAAGTGGAACAACGCACTTCTAGAGATGTTTAGAATAGACTACGTGGGAAACTCTTCTTACATCAGCTGTCTACCATATCTAAAACACCACAGATTAGGTCCAAAGGACAAATTTTTGATTCTATGCTCCGATGGGCTCTATCAGTACTTGTCAAACGAAGAAGCAGTGGCTGAAGTTGAGCATTTCATCACATTGCAACCCGAGGGAGACCCGGCTCAGCATTTGGTTGAAGAAGTGTTATTTCGTGCTGCAAAGAAAGCTGGGTTGGTCTTTCACGAGTTGCTCGAAATTCCACAGGGTGATAGGCGCCGTTACCATGATGATGTTTCCATCATTGTTATTTCTTTGGAAGGAAGAATATGGAGATCATGTGTATAA 2133 0.5035 MGNGIGKLTVCFTGNNGGGRRKQDISILITEPLDEGLGHSFCYVRPDPTRISSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFASLPLQPIPRNLVNSGPFSGNLGGGGFPGSGPLERGFMSGPIERGFMSGPIDRGLFSGPMEREGNGSDHFPRSFSHGGMGLGLGLGLRVRTRKGRWIRVLQRAISKTLSRGQNSVVAPIKGVVVKEPEWMVAAAEKHNENLSVNLSSEGSLEDDESMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYTAVHKELKGLLWDDGSAPENSTPKEEVLRDVTDVADAVDACSHCVEHENSNCNKSTSKKGRNSRNKYKGAANKWEENQRRWKCEWDRERLELDRRLKEQLNSSRSGCGGAASSINHADVLEALSRALRKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDVDNSNLVPSLSAIQLTKDHSTSVEEEIQRIKKEHPDDPCAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSSYISCLPYLKHHRLGPKDKFLILCSDGLYQYLSNEEAVAEVEHFITLQPEGDPAQHLVEEVLFRAAKKAGLVFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02126 710 SMART PP2C_4 260 699 IPR001932 -
Viun11g02126 710 PANTHER PROTEIN PHOSPHATASE 2C 256 699 IPR015655 GO:0004722|GO:0006470
Viun11g02126 710 ProSiteProfiles PPM-type phosphatase domain profile. 259 701 IPR001932 -
Viun11g02126 710 SUPERFAMILY PP2C-like 273 702 IPR036457 -
Viun11g02126 710 Gene3D - 237 706 IPR036457 -
Viun11g02126 710 MobiDBLite consensus disorder prediction 361 382 - -
Viun11g02126 710 CDD PP2Cc 424 701 IPR001932 -
Viun11g02126 710 FunFam probable protein phosphatase 2C 4 237 706 - -
Viun11g02126 710 Pfam Protein phosphatase 2C 416 657 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02126 Viun-Chr11 36468064 36471255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02126 1 710 PP2C-type Phosphatase Gene Family AT1G07630 67.313 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02126 - - pvu:PHAVU_011G064200g 1295.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02126 11 36468064 36471255 Viun11g02126 11 36468064 36471255 ECH