LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun11g02114	ATGGCGAATACACTCATTTCGTCTCCTTCGTTCCTCGGCACGCCTCTTCCCTCGCTCCCACGCCACCACCGCACCACCACAAGGCTTGTCGCCACCAAGGTCCACGTCAGCCTCCACCAAATCCCCCCTATCCACTCCATAAGCCACTCCATTGACTTCGTCGGTATCGCCACCAGAGCCGAAGGCCTTCTTTACACGCTCGCCGACGCTGCGGTTGCGGCGGACCCCGCCGCTCCCGCCACTGATGCTGTCGTGCAGAAGAACGGAGGCTGGTTCGGCTTCATCTCCGAAGCCATGGAGGCTATTCTCAAGGTGTTGAAGGATGGTCTTTCTGCTGTGCATGTGCCTTATGCATATGGATTTGCTATCATATTACTCACTGTTATAGTTAAGGCTGCAACACTTCCCTTGACAAAGCAACAGGTCGAATCTACATTGGCTATGCAAAATCTTCAACCAAAAATTAAGGCTATTCAAGAAAGATATGCTGGCAATCAGGAAAGAATACAACTTGAGACATCAAGGCTATATCGGCAGGCTGGGGTTAATCCATTGGCAGGTTGTTTACCTACTTTGGCCACAATTCCAGTCTGGATTGGTCTCTACCAAGCATTGTCAAATGTGGCAAATGAGGGACTATTAACTGAGGGTTTCTTTTGGATACCCTCTTTGGCTGGTCCTACTACCATTGCTGCTAGGCAAAGTGGAGCTGGAATTTCTTGGCTTTTTCCATTTGTGGATGGGCATCCACCTTTGGGTTGGCAAGATACTGCAGCATATCTTATTTTACCCGTTCTTCTTGTTGTTTCTCAATTTGTTTCAATGGAAATCATGAAACCACCTGAGACAGATCCTTCTCAAAAGAATCAACTTCTTGTTTTAAAGTTTCTTCCACTCATGATCGGCTACTTCTCACTATCTGTCCCATCAGGATTAACAATTTACTGGTTTATAAACAATGTTCTGAGCACAGCTCAACAAGTATGGTTGCGCAAATTGGGGGGTGCAAAGCCTGTTGTGAATGAAAATGCCAGTGGCATTATTACTGCAGGACGAGCTAAAAGATCAGATTTGCAGCCGGCAAAAGGCGGTGAAAGGTTTAAGCAGTTAAAAGAAGAGGAAAAGAAGAAAAAGTTAAGCAAGGCACTGCCAGTGGAAGATATTCAGCCTCTGGCATCTGTTTCTGCTTCTGATGATGGCTCAGACATAGATAGTGACAGCAAGGAACAGGAAGTTGAAGAAGGAGCCTATGCTTCCAAAGTTGGTGAAGAGGTTCAAATTAATTCTAGGGAAAGAAGAAGCAAGCGTTCGAAGCGGAAGCGTGCTGTATAA	1332	0.4647	MANTLISSPSFLGTPLPSLPRHHRTTTRLVATKVHVSLHQIPPIHSISHSIDFVGIATRAEGLLYTLADAAVAADPAAPATDAVVQKNGGWFGFISEAMEAILKVLKDGLSAVHVPYAYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLAGPTTIAARQSGAGISWLFPFVDGHPPLGWQDTAAYLILPVLLVVSQFVSMEIMKPPETDPSQKNQLLVLKFLPLMIGYFSLSVPSGLTIYWFINNVLSTAQQVWLRKLGGAKPVVNENASGIITAGRAKRSDLQPAKGGERFKQLKEEEKKKKLSKALPVEDIQPLASVSASDDGSDIDSDSKEQEVEEGAYASKVGEEVQINSRERRSKRSKRKRAV	443

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun11g02114	443	CDD	5TM_YidC_Alb3	120	332	IPR047196	-
	Viun11g02114	443	MobiDBLite	consensus disorder prediction	390	443	-	-
	Viun11g02114	443	PANTHER	OXA1	68	377	IPR001708	GO:0016020\|GO:0032977
	Viun11g02114	443	NCBIfam	membrane protein insertase YidC	119	331	IPR028055	-
	Viun11g02114	443	Pfam	60Kd inner membrane protein	119	332	IPR028055	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun11g02114	Viun-Chr11	36349222	36354917	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun11g02114	21	388	Chloroplast and Mitochondria Gene Families	AT2G28800	68.108	3.71e-179	506

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun11g02114	K03217		-	gmx:100813782	706.057

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Viun11g02114	11	36349222	36354917	Viun11g02114	11	36349222	36354917	ECH