Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02113 ATGGCGAATACACTCATTTCGTCTCCTTCGTTCCTCGGCACGCCTCTTCCCTCGCTCCCACGCCACCACCGCACCACCACAAGGCTTGTCGCCACCAAGGTCCACGTCAGCCTCCACCAAATCCCCCCTATCCACTCCATAAGCCACTCCATTGACTTCGTCGGTATCGCCACCAGAGCCGAAGGCCTTCTTTACACGCTCGCCGACGCTGCGGTTGCGGCGGACCCCGCCGCTCCCGCCACTGATGCTGTCGTGCAGAAGAACGGAGGCTGGTTCGGCTTCATCTCCGAAGCCATGGAGGCTATTCTCAAGGTGTTGAAGGATGGTCTTTCTGCTGTGCATGTGCCTTATGCATATGGATTTGCTATCATATTACTCACTGTTATAGTTAAGGCTGCAACACTTCCCTTGACAAAGCAACAGGTCGAATCTACATTGGCTATGCAAAATCTTCAACCAAAAATTAAGGCTATTCAAGAAAGATATGCTGGCAATCAGGAAAGAATACAACTTGAGACATCAAGGCTATATCGGCAGGCTGGGGTTAATCCATTGGCAGGTTGTTTACCTACTTTGGCCACAATTCCAGTCTGGATTGGTCTCTACCAAGCATTGTCAAATGTGGCAAATGAGGGACTATTAACTGAGGGTTTCTTTTGGATACCCTCTTTGGCTGGTCCTACTACCATTGCTGCTAGGCAAAGTGGAGCTGGAATTTCTTGGCTTTTTCCATTTGTGGATGGGCATCCACCTTTGGGTTGGCAAGATACTGCAGCATATCTTATTTTACCCGTTCTTCTTGTTGTTTCTCAATTTGTTTCAATGGAAATCATGAAACCACCTGAGACAGATCCTTCTCAAAAGAATCAACTTCTTGTTTTAAAGTTTCTTCCACTCATGATCGGCTACTTCTCACTATCTGTCCCATCAGGATTAACAATTTACTGGTTTATAAACAATGTTCTGAGCACAGCTCAACAAGTATGGTTGCGCAAATTGGGGGGTGCAAAGCCTGTTGTGAATGAAAATGCCAGTGGCATTATTACTGCAGGACGAGCTAAAAGATCAGATTTGCAGCCGGCAAAAGGCGGTGAAAGGTTTAAGCAGTTAAAAGAAGAGGAAAAGAAGAAAAAGTTAAGCAAGGCACTGCCAGTGGAAGATATTCAGCCTCTGGCATCTGTTTCTGCTTCTGATGATGGCTCAGACATAGATAGTGACAGCAAGGAAGTTGAAGAAGGAGCCTATGCTTCCAAAGTTGGTGAAGAGGTTCAAATTAATTCTAGGGAAAGAAGAAGCAAGCGTTCGAAGCGGAAGCGTGCTGTATAA 1326 0.4646 MANTLISSPSFLGTPLPSLPRHHRTTTRLVATKVHVSLHQIPPIHSISHSIDFVGIATRAEGLLYTLADAAVAADPAAPATDAVVQKNGGWFGFISEAMEAILKVLKDGLSAVHVPYAYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLAGPTTIAARQSGAGISWLFPFVDGHPPLGWQDTAAYLILPVLLVVSQFVSMEIMKPPETDPSQKNQLLVLKFLPLMIGYFSLSVPSGLTIYWFINNVLSTAQQVWLRKLGGAKPVVNENASGIITAGRAKRSDLQPAKGGERFKQLKEEEKKKKLSKALPVEDIQPLASVSASDDGSDIDSDSKEVEEGAYASKVGEEVQINSRERRSKRSKRKRAV 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02113 441 CDD 5TM_YidC_Alb3 120 332 IPR047196 -
Viun11g02113 441 MobiDBLite consensus disorder prediction 401 416 - -
Viun11g02113 441 MobiDBLite consensus disorder prediction 390 441 - -
Viun11g02113 441 PANTHER OXA1 68 377 IPR001708 GO:0016020|GO:0032977
Viun11g02113 441 NCBIfam membrane protein insertase YidC 119 331 IPR028055 -
Viun11g02113 441 Pfam 60Kd inner membrane protein 119 332 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02113 Viun-Chr11 36349222 36354921 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02113 21 388 Chloroplast and Mitochondria Gene Families AT2G28800 68.108 5.27e-179 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02113 K03217 - gmx:100813782 699.893