Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02091 ATGGTTCAAGAAGAAATGAGAAGGGGTCCATGGACAGAACAGGAGGATCTGAAACTGGTGTATTTTGTAAACATGTTTGGAGATCGTAGGTGGGACTTTATAGCAAAGGTATCAGGTTTGAATAGAACAGGTAAGAGTTGCAGGTTACGGTGGGTTAATTACCTCCACCCTGATCTCAAACGAGGGAAGCTGACATCCCAAGAAGAACACCTCGTCATGGAGCTTCATTCCAAATGGGGAAATAGATGGTCAAGAATTGCTCGGAAGCTACCAGGGCGCACTGACAATGAGATTAAGAATTTCTGGAGGACTTTCATGAGGAAAAAGAAGGCTCTAGAGAAAAAACGAGCATCACCATCATCATCTTCCGGTTCTCTATCTTCACTCTCCTCAAACAACCATGCTGTTGATGCTGATGATTCACATGCTTCCAAAGAGGTTGGAGAGGAGAGTTTTTACGACACAGGTGGATATGATGACATAATGGGGTTGATCGGTGCTGGAGAAGAGTGTTCTTTGGATGATATATGGAAAGATATTGTTTTGTCAGAAGATAACAATAACAATAACAATAACAATATCAATATTCTGCAACAACCTGTGTACGAATTGCACAGTGAAGAGGGTTCAAAGATTTATTCCCCATCATCATGGGAGTACAATTGTTCTCACCCTTTATGGGTGATGGATGATGAAGAAGAAAGCAACAAGATGTTGTTTCCTGCATCAAGTGACCAATACTATTCCTGGTATGAACAAGGGAATGCATTTCTAACTGGCTAA 783 0.4138 MVQEEMRRGPWTEQEDLKLVYFVNMFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPDLKRGKLTSQEEHLVMELHSKWGNRWSRIARKLPGRTDNEIKNFWRTFMRKKKALEKKRASPSSSSGSLSSLSSNNHAVDADDSHASKEVGEESFYDTGGYDDIMGLIGAGEECSLDDIWKDIVLSEDNNNNNNNNINILQQPVYELHSEEGSKIYSPSSWEYNCSHPLWVMDDEEESNKMLFPASSDQYYSWYEQGNAFLTG 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02091 260 FunFam Myb transcription factor 8 60 - -
Viun11g02091 260 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Viun11g02091 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Viun11g02091 260 FunFam MYB-related transcription factor 64 110 - -
Viun11g02091 260 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Viun11g02091 260 CDD SANT 65 106 IPR001005 -
Viun11g02091 260 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 2 123 IPR044676 GO:0003700|GO:0006355|GO:0043565
Viun11g02091 260 SMART sant 7 57 IPR001005 -
Viun11g02091 260 SMART sant 60 108 IPR001005 -
Viun11g02091 260 Gene3D - 8 60 - -
Viun11g02091 260 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Viun11g02091 260 Gene3D - 64 107 - -
Viun11g02091 260 CDD SANT 10 55 IPR001005 -
Viun11g02091 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Viun11g02091 260 MobiDBLite consensus disorder prediction 117 137 - -
Viun11g02091 260 MobiDBLite consensus disorder prediction 112 148 - -
Viun11g02091 260 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Viun11g02091 260 Pfam Myb-like DNA-binding domain 61 104 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02091 Viun-Chr11 36234057 36235433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02091 1 258 MYB Transcription Factor Family AT5G59780 47.566 1.82e-69 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Viun11g02091 Myb_DNA-binding 2.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02091 K09422 - gmx:100776886 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02091 11 36234057 36235433 Viun5g03514 5 44976444 44978167 PCT