Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02086 ATGAACATGGATTCTCATCATTTCTTCCTCCTTCAGCTCCTACTAGCTTTTTTCTTTCTCTCTTTAGCTTTTGGAGCCACTCTGCCAGAAGATGAAGTGGAAGCTTTGAAAGACATAGGTGAGAGTCTTGGGAAGAAGGATTGGGATTTCAGTGTTGATCCATGCAGTGGAGAACACAATTGGACATCGCAAACTAAAGTGAGAGGGACAGAAAATAATGTCACCTGTGATTGTTCCTTTGAGAATGCCACAATCTGCCATGTTACTAACATACTTTTGAAAGTACAAAATCTCCGAGGAACTCTCCCAGTAGCAATGGTTAGATTGCCGTACCTTCAAGAAATTGATCTTAGTCGCAATTACCTGAATGGGACAATTCCTCCGGAGTGGGGCTTATTGAATCTTGTCCACATTTCTCTGAGTGCTAATCGACTCACGGGTTCAATCCCCCCAGAGCTTGCAAACATCTCCACTCTCCAAAGTTTGACCCTCGAATTCAACCAACTCTCTGGAAATCTTCCTAGTGAGCTTGGGAATCTTCCAAATATTCAAAGACTGCTACTTACCTCCAACAATTTTACTGGAGAGTTGCCTGCAACATTTGCAAGACTCACTACTTTGCAGGAAGTTCGACTAGGGGATAACAAGTTCTCTGGAAGGATACCCGATTTTATTCAAAGCTGGACAAGTGTCCAGAAACTAGTGATTCAAGGAACTGGATTAAGTGGGCCAATTCCTTCTGGAATTTCACTACTTGAAAGTTTAACAGACTTGAGAATTAGTGATATAGAGGGATCAGACTATTTTCCTTTTCCCCAACTTGACAATCTGGCAAATTTGGAAATTCTAATTCTGAGGAGTTGCAATATCAATGGAACAATACCTGAATATCTGGGGAATATGTCTAATTTACAAACCTTAGACCTCAGCTTTAACAGATTAAGTGGACAGATTCCAAGCAGCTTTGAGTATGGCTTAAGAAAGACAGATTATATATATTTAACTGGAAACATCCTCACGGGACCTGTACCTGCATGGGCAGAGAAAGAAAAAAATGTAGATCTTTCGTACAATAACTTTACCATGGAAAACTCAGGACAGCAGCCATGTCAACGGGGAAATGTGAACTTGTTTGCAAGCTACTCGGTGGACAATAGCTCAGAATCCGTTTCATGTTTAAGAAGTGTTGCCTGTCCTAAAAAATCACACTCTCTTCATATAAATTGTGGTGGAAAGCAAGTAACAGTGGATGGAAATGAAACATATGATGAGGATACAGATAATGCAGGACCAGCTAGGTTCCACCTAAGTGGAAAAAACTGGGGATTTAGCAGCACTGGTCACTTCATGGATAATGACCGTGCAGAATATTATACTTGGCTAAATCAATCTCAGCTTTTCTTGGCTGATGCTGAAATATACATGGATGCACGTGTTTCTCCCATTTCTCTCACTTATTATGGGTTTTGCCTGGGAAATGGAAACTACACGGTGAATCTACACTTTGCAGAGGTCATGTTTACTGAAGATCAAACATTTAACAGCCTAGGAAGACGCATATTTGATGTCTACATTCAGGGAAACATGGTGCTCAAGAATTTCAATATTGCAGAAGAAGCAGGAGGAGTTAATAAAGCAGTCACAAAATCATTTACCATTGTGATTAGTAGCAACACATTGGAAATTCGCCTATATTGGACTGGGAAAGGCACAATTGGTATTCCATTTAAATCAGTATATGGTCCTCTTATATCAGCTATTTCTGTAAATCCCAACTTCATCCCTCCCTCAGAAAATGGAAGTAGAATATCTGCAGGTGCTGTGGTTGCAATTGTGGCTGGTGCAGTAGTCTTTCTAGTCCTGGTGTTTGGTATACTTTGGTGGAGAGGCTTTCTAGGACAGAAAAGTTCTTTAGCAAAAGAGCTAAAGGGGTTAAAACTGCAAATGGGTATATTTACCTTACGACAAATCAAAGCAGCAACAAATAACTTCAACAAAGCCAACAAAATTGGAGAAGGAGGGTTTGGTCCTGTGTACAAGGGAAATTTATCAGATGGGACAATAATAGCAGTGAAGCAGCTTTCTTCCAAATCAAGGCAGGGGAATCGTGAGTTTATAAATGAGCTTGGCATGATTTCAGCTTTGCAACATCCTTGTCTTGTTAAACTTTATGGATGCTGTGTTGAGGGAGATCAATTGTTGTTGGTCTATGAATATATGGAAAACAATAGCCTTGCTCGTGCTTTGTTCGGTCCAGAAGAACACCAAATTAAATTGGATTGGCCTACAAGGCAAAACATCTGTGTTGGTATTGCCAAAGGTTTGGCATACCTGCATGAAGAATCAAGATTGAAAATCGTTCATAGGGACATCAAGACCACTAACGTGTTGCTTGATAAAGATCTCAAACCAAAGATATCTGACTTTGGTTTAGCCAAGCTCGATGAAGAGGACAATACCCACATAAGCACCCGAATTGCTGGAACTTATGGATACATGGCTCCTGAGTATGCCATGCATGGTTATTTGACTGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCCTTGGAAATTATAAGTGGGAGGAGCAATATAATCCAACGACATAAAGAAGCATCATTGCATCTTCTTGATTGGGCACACATGCTAAAAGAGAGTGGCAATCTAATGGAGTTAATTGATGGTAGATTGGGTTTGGACTTCAACAAAAAGGAGGTTATCACAATGATCAATGTGGCTCTTTTATGCACCAATGCAACAGCATCCCTCAGGCCTACAATGTCCTCAGTAGTAAGCATGCTTGAAGGTAGATCTGTGGTTCAGGAGTTGATTTCAGAGTCAAGTGAGACACTGGATGAGAAGAAGTTGGAAGTAATGCGACAGCATTACCAAGAGATAGAAGAAAATAATCTAAGTGAGAGCAACAATCAGAGTCTCTCAGTGGATGACACATTGGCCACTTCATCTATATCTGCAACAGATCTATACCCTGTAAACATGAATTCTTCATACTGGGAGAAAAGGGGTTGGTGA 3036 0.4038 MNMDSHHFFLLQLLLAFFFLSLAFGATLPEDEVEALKDIGESLGKKDWDFSVDPCSGEHNWTSQTKVRGTENNVTCDCSFENATICHVTNILLKVQNLRGTLPVAMVRLPYLQEIDLSRNYLNGTIPPEWGLLNLVHISLSANRLTGSIPPELANISTLQSLTLEFNQLSGNLPSELGNLPNIQRLLLTSNNFTGELPATFARLTTLQEVRLGDNKFSGRIPDFIQSWTSVQKLVIQGTGLSGPIPSGISLLESLTDLRISDIEGSDYFPFPQLDNLANLEILILRSCNINGTIPEYLGNMSNLQTLDLSFNRLSGQIPSSFEYGLRKTDYIYLTGNILTGPVPAWAEKEKNVDLSYNNFTMENSGQQPCQRGNVNLFASYSVDNSSESVSCLRSVACPKKSHSLHINCGGKQVTVDGNETYDEDTDNAGPARFHLSGKNWGFSSTGHFMDNDRAEYYTWLNQSQLFLADAEIYMDARVSPISLTYYGFCLGNGNYTVNLHFAEVMFTEDQTFNSLGRRIFDVYIQGNMVLKNFNIAEEAGGVNKAVTKSFTIVISSNTLEIRLYWTGKGTIGIPFKSVYGPLISAISVNPNFIPPSENGSRISAGAVVAIVAGAVVFLVLVFGILWWRGFLGQKSSLAKELKGLKLQMGIFTLRQIKAATNNFNKANKIGEGGFGPVYKGNLSDGTIIAVKQLSSKSRQGNREFINELGMISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLARALFGPEEHQIKLDWPTRQNICVGIAKGLAYLHEESRLKIVHRDIKTTNVLLDKDLKPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIISGRSNIIQRHKEASLHLLDWAHMLKESGNLMELIDGRLGLDFNKKEVITMINVALLCTNATASLRPTMSSVVSMLEGRSVVQELISESSETLDEKKLEVMRQHYQEIEENNLSESNNQSLSVDDTLATSSISATDLYPVNMNSSYWEKRGW 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02086 1011 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 973 - -
Viun11g02086 1011 Gene3D Phosphorylase Kinase; domain 1 633 739 - -
Viun11g02086 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Viun11g02086 1011 SUPERFAMILY L domain-like 70 345 - -
Viun11g02086 1011 Gene3D - 401 592 - -
Viun11g02086 1011 ProSiteProfiles Protein kinase domain profile. 664 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02086 1011 Gene3D Transferase(Phosphotransferase) domain 1 740 952 - -
Viun11g02086 1011 Pfam Malectin domain 404 587 IPR021720 -
Viun11g02086 1011 Pfam Leucine rich repeat 279 337 IPR001611 GO:0005515
Viun11g02086 1011 Gene3D Ribonuclease Inhibitor 269 372 IPR032675 -
Viun11g02086 1011 FunFam Putative LRR receptor-like serine/threonine-protein kinase 740 947 - -
Viun11g02086 1011 SMART serkin_6 664 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02086 1011 Pfam Protein tyrosine and serine/threonine kinase 667 935 IPR001245 GO:0004672|GO:0006468
Viun11g02086 1011 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 402 592 - -
Viun11g02086 1011 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 633 739 - -
Viun11g02086 1011 Gene3D Ribonuclease Inhibitor 29 268 IPR032675 -
Viun11g02086 1011 ProSiteProfiles Leucine-rich repeat profile. 303 325 IPR001611 GO:0005515
Viun11g02086 1011 FunFam Leucine-rich repeat transmembrane protein kinase 200 405 - -
Viun11g02086 1011 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase isoform A 32 191 - -
Viun11g02086 1011 CDD STKc_IRAK 670 937 - -
Viun11g02086 1011 SUPERFAMILY Protein kinase-like (PK-like) 648 942 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02086 Viun-Chr11 36216624 36223466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02086 19 967 Receptor kinase-like Gene Family AT1G53420 55.172 0.0 1029
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g02086 PK_Tyr_Ser-Thr 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02086 - - gmx:732563 1389.79