Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02055 ATGCACTCACTCACTAACTCACTCTTCACCTTCTTCTCTTCTCTTCTACAAATCATAGTAGAATTCTCTCATAACATGTACTCACACCGCAACGCCTCCCTCTCACCCTCCGCCGAATCCCTCGCCCATTTTCTCTCTCCGCAGGACGCATCCACGGCGGCGCCAATGCAGTACGCCGCCGCTCCTCAGCCGCACCACCACCAAGTGGCCCTGGGCGAGTTTGATTCAGAGGCGAGTTCGAATAACACGTACAACAGCTGCAGCAGCGGGTGCACCAGCTACATGGGGTCGCCGAGTTCGCTGGCGAGTTACGAGACTCGGCGGGTGCAGAGGAGCGTGAGCAGCCACTCGCTGCAGAAGAACAGTGGTGGGCCCCACCACCCCTTTTCTCCTCTCTTCGCTCAGTTGCTTGATTCCCAAAACGGTCCCGTACGGAGAGCTTGCAGTACCGGTGACCTTCAGAGATTTCATGGAATGCAATATTATCATCATTCAGATAGTCCATTGTCGAGTGAAAGTAGCTTGATCATAGAAGAAATGAGCAGAACCAGTCCTTATAGCCCAGAGGAGAAGAAAGTGAGGATTGAGAGATATAGGAGCAAGAGAAATCAGAGGAACTTCGGCAAGAAAATTAAGTATGCATGCAGGAAGACATTGGCAGATAGCAGGCCACGAATCAGAGGACGATTTGCAAAGAATGACGAAATTGCAATGAACCCTCCACTTCAGTGGAGTCACATGGGTAATGGAGAGGAAGAGGATGAAGAGGAAGAGAATTGGGTCAATTTCTTTGATTCCATAGTTCCTGCAAATCTTGCTCAAGAGCCTCATGGAAATAATTCCTCCTTTGGCACATTCTATTAA 864 0.4988 MHSLTNSLFTFFSSLLQIIVEFSHNMYSHRNASLSPSAESLAHFLSPQDASTAAPMQYAAAPQPHHHQVALGEFDSEASSNNTYNSCSSGCTSYMGSPSSLASYETRRVQRSVSSHSLQKNSGGPHHPFSPLFAQLLDSQNGPVRRACSTGDLQRFHGMQYYHHSDSPLSSESSLIIEEMSRTSPYSPEEKKVRIERYRSKRNQRNFGKKIKYACRKTLADSRPRIRGRFAKNDEIAMNPPLQWSHMGNGEEEDEEEENWVNFFDSIVPANLAQEPHGNNSSFGTFY 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02055 287 ProSiteProfiles CCT domain profile. 191 233 IPR010402 GO:0005515
Viun11g02055 287 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 49 255 IPR045281 GO:0009909
Viun11g02055 287 MobiDBLite consensus disorder prediction 111 130 - -
Viun11g02055 287 Pfam CCT motif 193 233 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02055 Viun-Chr11 36036059 36038691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02055 187 236 C2C2-CO-like Transcription Factor Family AT5G15850 50.000 3.41e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun11g02055 CCT 3.8e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02055 - - gmx:102667610 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03477 5 44833944 44836353 Viun11g02055 11 36036059 36038691 PCT