Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02044 ATGGAAGCATTTCCGAGAGACCAACGTGGCTCGCTCGAAGTGTTCAACCCTTCGTCTTCTTACTCCAACGAGAAGCCGGTCAACTCGCCATTGCGCACTCAATCCACGTGGAAGACGTGGATGGAGTCACGCGCCGAGGAGCCACCGGAGGAGCAGCAACGCGGCGGTTCCGATGAGGTCACAGCCACGTCGTGGATGGCGCTAAAGGACTCCACTCCGCCGCTGCCAGCACAGACACTCGCCGCGGTGCTAGGCGAGCCTCCGGCGGAGGTCGGAAATGCCGCGAAGCGCGCCGCGGAATGGGGTCTGGTGCTGAAGACGGACACGGAAACCGGAAAGCCGCAGGGAGTGGCGGTTCGGACCTCCGGCGGGGAGGAGCCGAGCGCGAAGGTGACCGGTGGGTCGAGGAGGGACTCCGGGAACTCCGTTCGGAGCTCCGGCGAGTCCTCCGACGACGGGAGGGAGTACCGGGGAGGAATCCCGAGGGTTTCGGAGGACCTGAGGGACGCTTTGTCGGCGTTTCAACAAACTTTCGTGGTTTCGGATGCTACCAAACCCGATTACCCGATAATGTATGCCAGTGCCGGGTTTTTCAAGATGACGGGTTACACATCAAAGGAAGTCATAGGGAGAAACTGCCGGTTTTTGCAGGGAGCAGACACGGATCCGGATGATGTGGCAAAGATAAGGGAAGCCTTACAAACGGGTCATACCTACTGTGGAAGGTTACTGAATTACAAGAAGGACGGCACTCCCTTTTGGAACCTTCTCACTATTGCCCCAATCAAGGACCACGATGGCAGAGTCCTTAAATTTATAGGAATGCAAGTGGAAGTTAGCAAGCATACAGAGGGGACGAAGGAGAAGATGCTACGTCCCAATGGATTACCCGAATCCTTGATTCGATACGATTCTCGTCAGAAAGAGAAGGCAAACGGTACAGTATCTGAGTTGTTGCTGGCTGTGAGGAGGCCACGGGCACTGAGTGAATCAGCAGGCCGGCCGTTGATCAGAAAGTCAGCATCCGGTGATGATGTTGAAGAGAAACCAGAAAAGTCATCGAGGAGAAAATCTGAGAGTGTGTCCTCTTTTAGACGCAAATCACATGCAGGTGACACAAGTTCAATGGAGAGAATCACTGAGCTACCTGAAAAGAAACACAAGACATCTCGTCGCCGTTCCTTCATGGGGTTCATCAGAAAAAGTCAGTCGAACTTTGGAAGCTTCAATGACGAAGGTGTTATTGAGGATAGTTCTGAGAATAGTGACGAGGATGATGATGAGAGGTCTGGTAGTTTTGATGGCAAAGTAAAGAAGAGGGAAAAGAGAAAGGGTCTTGATCTTGCTACCACACTTGAACGTATTGAGAAGAACTTCGTTATTACTGATCCCAGGCTGCCAGATAACCCAATTATTTTTGCATCTGACAGCTTCTTGGAGCTTACGGAGTATAGTCGTGAAGAAATCTTGGGAAGAAATTGCAGGTTTCTGCAAGGGCCTGAAACTGATCCAGCAACAGTGAGAAAAATTAGAGAGGCCATTGACACTCAAACTGACGTCACGGTGCAACTCATTAATTATACAAAGAGTGGTAAAAAGTTCTGGAATTTGTTTCATTTGCAACCTATGCGTGATCAGAAGGGAGAGGTACAGTACTTCATTGGAGTTCAACTTGATGGTAGTCAACACGTGGAGCCTCTTCACAACCGCATTGCAGAAAATACTGCTAAAGAGGGAGAACAATTGGTGAAGGAAACTGCTGAAAATGTCGATGATGCATTGAGAGAACTTCCAGATGCTAATTTGAAACCAGAAGATTTATGGATGAATCATTCAAAAGTGGTTCACCCGAAACCACATAGGAGGGATGAAGCTGCATGGAAAGCTATTCAGAAGATCCTAGAAAGTGGAGAGCAGATAGGCTTGAATCATTTTAGGCCAGTTAAACCTTTGGGATCAGGAGATACTGGCAGTGTCTATCTGGTGGAGTTAGGTGAAACTGGCCAATATTTTGCCATGAAGGCTATGGAGAAGGGTATTATGCTCAATCGTAACAAGGTGCACAGAGCTTGCACAGAGAGAGAGATCCTGGACATGTTGGACCACCCTTTTCTTCCTGCATTATATGCTTCCTTTCAGACCAAAACACATGTTTGTTTGATAACCGATTACTGTTCTGGTGGAGAACTGTTCCTTCTTCTTGACCGACAGCCAGCTAAGGTTCTCAGGGAAGATGCAGTGAGATTTTATGCTGCGGAAGTAGTTGTTGCATTGGAGTATCTTCATTGTCAAGGTATAATATATCGGGATTTGAAGCCAGAAAATGTGTTACTACAAAGCAGTGGACACGTGTCCCTAACAGATTTTGATTTGTCATGTTTGACATCTTGCAAACCACAGCTTCTAGTTCCATCTATAAATGAAAAGAAGAAAGCACAGAAAAGCCAACAACCTCCAATATTTATGGCAGAACCTATGAGAGCATCAAACTCTTTTGTGGGCACAGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGCCATACTAGTGCCGTGGATTGGTGGGCTCTTGGAATTCTTCTATACGAAATGTTTTTTGGATATACACCATTCAGGGGAAAGACCAGGCAAAGAACATTTACAAATATTCTGCATAAGGACCTTAAATTTCCCAAAAGTAAACAGGTAAGTTTCAGTGCAAAGCAATTAATGTATCGGTTGCTGAACAGAGACCCCAAAAGCAGATTGGGTTCAAGAGAAGGAGCAAATGAAATTAAGAACCATCCATTCTTTCGGGGTGTCAATTGGGCCCTAGTTCGTTGCACGAAACCTCCTGAGCTGGATGCACCTCTCTTCGAAATAACTGAAGAAGAAAAGGAAGCCAAGTTTGAAGATCAAGTGCAAGAGCAAATGAGCGTCTTCTGA 2928 0.4723 MEAFPRDQRGSLEVFNPSSSYSNEKPVNSPLRTQSTWKTWMESRAEEPPEEQQRGGSDEVTATSWMALKDSTPPLPAQTLAAVLGEPPAEVGNAAKRAAEWGLVLKTDTETGKPQGVAVRTSGGEEPSAKVTGGSRRDSGNSVRSSGESSDDGREYRGGIPRVSEDLRDALSAFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPDDVAKIREALQTGHTYCGRLLNYKKDGTPFWNLLTIAPIKDHDGRVLKFIGMQVEVSKHTEGTKEKMLRPNGLPESLIRYDSRQKEKANGTVSELLLAVRRPRALSESAGRPLIRKSASGDDVEEKPEKSSRRKSESVSSFRRKSHAGDTSSMERITELPEKKHKTSRRRSFMGFIRKSQSNFGSFNDEGVIEDSSENSDEDDDERSGSFDGKVKKREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDTQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIAENTAKEGEQLVKETAENVDDALRELPDANLKPEDLWMNHSKVVHPKPHRRDEAAWKAIQKILESGEQIGLNHFRPVKPLGSGDTGSVYLVELGETGQYFAMKAMEKGIMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLITDYCSGGELFLLLDRQPAKVLREDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQSSGHVSLTDFDLSCLTSCKPQLLVPSINEKKKAQKSQQPPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMFFGYTPFRGKTRQRTFTNILHKDLKFPKSKQVSFSAKQLMYRLLNRDPKSRLGSREGANEIKNHPFFRGVNWALVRCTKPPELDAPLFEITEEEKEAKFEDQVQEQMSVF 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02044 975 SUPERFAMILY Protein kinase-like (PK-like) 629 952 IPR011009 -
Viun11g02044 975 MobiDBLite consensus disorder prediction 1 73 - -
Viun11g02044 975 SMART pas_2 165 234 IPR000014 -
Viun11g02044 975 SMART pas_2 446 515 IPR000014 -
Viun11g02044 975 Gene3D Phosphorylase Kinase; domain 1 644 728 - -
Viun11g02044 975 CDD PAS 459 559 IPR000014 -
Viun11g02044 975 FunFam LOV domain-containing protein 644 728 - -
Viun11g02044 975 SUPERFAMILY PYP-like sensor domain (PAS domain) 184 276 IPR035965 -
Viun11g02044 975 Gene3D PAS domain 433 597 - -
Viun11g02044 975 ProSiteProfiles Protein kinase domain profile. 645 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02044 975 CDD STKc_phototropin_like 644 951 - -
Viun11g02044 975 SMART pac_2 521 563 IPR001610 -
Viun11g02044 975 SMART pac_2 240 282 IPR001610 -
Viun11g02044 975 Gene3D PAS domain 177 333 - -
Viun11g02044 975 PANTHER FLIPPASE KINASE 1-RELATED 318 957 - -
Viun11g02044 975 ProSiteProfiles PAS repeat profile. 444 517 IPR000014 -
Viun11g02044 975 MobiDBLite consensus disorder prediction 340 388 - -
Viun11g02044 975 MobiDBLite consensus disorder prediction 409 440 - -
Viun11g02044 975 ProSitePatterns Serine/Threonine protein kinases active-site signature. 766 778 IPR008271 GO:0004672|GO:0006468
Viun11g02044 975 MobiDBLite consensus disorder prediction 12 41 - -
Viun11g02044 975 ProSiteProfiles PAC domain profile. 237 291 IPR000700 -
Viun11g02044 975 MobiDBLite consensus disorder prediction 330 393 - -
Viun11g02044 975 Gene3D Transferase(Phosphotransferase) domain 1 729 944 - -
Viun11g02044 975 FunFam Putative LOV domain-containing protein 729 944 - -
Viun11g02044 975 CDD PAS 190 279 IPR000014 -
Viun11g02044 975 FunFam Putative LOV domain-containing protein 177 333 - -
Viun11g02044 975 Pfam PAS domain 467 559 IPR000014 -
Viun11g02044 975 Pfam PAS domain 184 280 IPR000014 -
Viun11g02044 975 Coils Coil 576 596 - -
Viun11g02044 975 ProSiteProfiles PAS repeat profile. 163 234 IPR000014 -
Viun11g02044 975 MobiDBLite consensus disorder prediction 106 160 - -
Viun11g02044 975 ProSiteProfiles PAC domain profile. 518 572 IPR000700 -
Viun11g02044 975 FunFam LOV domain-containing protein 433 597 - -
Viun11g02044 975 SMART serkin_6 645 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02044 975 SUPERFAMILY PYP-like sensor domain (PAS domain) 460 559 IPR035965 -
Viun11g02044 975 ProSitePatterns Protein kinases ATP-binding region signature. 651 674 IPR017441 GO:0005524
Viun11g02044 975 NCBIfam PAS domain S-box protein 190 284 IPR000014 -
Viun11g02044 975 NCBIfam PAS domain S-box protein 469 559 IPR000014 -
Viun11g02044 975 Pfam Protein kinase domain 648 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02044 Viun-Chr11 35960864 35971569 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02044 4 975 AGC Kinase Gene Family AT3G45780 69.718 0.0 1335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Viun11g02044 Pkinase 5.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02044 K20715 - gmx:100804524 1742.24