Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun11g02040 | ATGTTGGGAAAGGGAAAAGAGGTTTGGCAGAACATAAATATGATTTTTGACAAAAAAAGCCTCAATTGTGGAGTAGCCAATGGAGGGGTAAGTTCTGGATCATCAACAGAAGATAACCCAAGATTTAATAAGCTGAGTCAAGATGGAAACAATAGATTGAGGGGTCTGATTCAAATCAATGGGAGCTTGCAGGTTTCACAGCAACCACCTCAAGGGCCAGTCATTTGCTGGGAGAGATTTCTCCCTGTGAGATCAATAAAAGTTTTGCTGGTGGAGGATGATGATTCAACACGCCATGTTGTGCGTGCTCTTTTACGCAATTGTAGTTACGAAGTTACTGCTGTTTCCAATGGTCTTCAAGCCTGGAAAGTCCTAGAAGATCCAGAAAATTGCATCGGTCTTGTCTTAACAGAGGTAGCTATGCCTATTTTGTCTGGAATAGGTCTTTTGTGCAAGATCATGAACCACAAAACACTGAAGAATATCCCTGTGATTATGATGTCGTCTCATGATTCTATGGGTATCGTCTTTAAGTGTTTATCAAAAGGCGCTGTTGACTTTTTAGTGAAACCTATTCGGAGGAATGAACTTAAAAATCTCTGGCAGCATGTCTGGAGAAGATGCCACAGTTCTAGTGGCAGTGGGAGTGAAAGTGCAACCAACACCAGAAAATCTACGAAGTCAAGAAGTAACGATGCTTCTGAAAACAATAGTGACAGCAATGAGGAGAATGACTATGGAAGCAAAGGCTTGAGCATTCGAGATGGAAGTGACAATGGAAGTGGCACTCAGAGTTCGTGGACTAAATGTCTGGCTCAAGTTGGCAGTCCTCATCCACTTTCACCACATAAACAATTGGTTGATGCCCCTGATAGCACTTGTGCCCAAGTGATGCAAACGAAGACTGAAAAAGTTAGTAGTAGATGGGTGCATGCAACAGAAAAGGAGTGCCTTGAACTTATTGATCATCTTGATGATGTTGCGATGGGCAAGGACTTAGCTGTGGGAATATCTTTGAGTATGCAACTAGAGCATCGACTTGAGGGACTGTCTAGCCATCCAATGGGTAAAGGGGCAAATAAAATGTCTGATGATGATGATATGCAGATAGTTAAAGGACAAAGTAATGCCTGTGAAAAAGGAGAACTGGAATGCAATGGTGGTAAAACCAGGACACAGGAAAATCAGACTATGAATGTTATTGATGTTACTGATAGCAACAGTCCACAGGCTGAAAGCAGAGACTTGAACACTCCAAATGGGTTCTCTGGTTTCTCACTAACGAAAGAAAACTGTTGCCCCAAAGAGCATCCATCCCTGGAACTATCTTTGAAAAGGCTGGGAGAAGTAAGAGATCCTAAAAATGTCACGGGTGAAGAATGCAATGTTTTAAGACATTCAGACCAATCAGCATTCTCAAAATATAATACTGCTTCTTCTGCTAACCAGGCTCAAACCCGAAATGTAGGAAGCTGTTCTCCACTAGCCAATGGCTCAGCTGCACCTAATGCAGAGGTAATACACAACTTTCCATCTCACTCAAATGTCACTCCTCCAAACCAACAATCTAATGGGAGCAACAACATCAATGACATGGCCTCCACTAATACATATCTTGGCACCAAACCTTGTACTTTTGACAAGATGCCAGAGTCTGTAAGAGGGCTGGGCTCATTTAATTCCTCTGAACGCCGAACTTTACCGAACAATAGTAAGAAAACTTATGCCCGGGAAGAATATATGGAAATTGTTAGAGGACAACTGGGAAGCTCTGAACATGAATTCCAAGCCGAGCACACTCATTATGAGCATCACCATTATAATCACATTTCCCGTAAAGCTGCTGTAGATCTCCAATCAGAGCATGATCTCTTACTCAAAAGCTCAACCAACACTGCTCAGCAATGTGTATCATCAAATGCGTTTGGAGGGCCAGCAGAAAGTAATGCTGCAAACTACACAATAGATGGAAATGCTGGGGAGAGTGATCACGGGAGCAATGGACATGGGAGCAATGGACAGGACGGAACCTTGACAATGAGGACAGTAAATATGGAAAATGGCAATGTGGCTTCTGGGAGCTTTGGAGTTGGTGGCATTGATAGGAAAAACATTGGGAATGGGGCAGATGAAGGACGACTTTCACTGAGAGAGGCTGCTTTGACCAAGTTTCGTCAAAAGAGAAAAGAAAGATGCTTTGAGAAAAGGGTTCGATATCATAGCAGGAAAAAACTAGCAGAACAGCGGCCTCGTATTAGGGGACAATTTGTTAGACGAATAGTGTCTGAAACCAAAGAAGAAAAAGATCACCAAAGTGACAACCTGGTACCTGGGGATCATACCGACATTCCTCAATAA | 2358 | 0.4262 | MLGKGKEVWQNIIXMIFDKKSLNCGVANGGVSSGSSTEDNPRFNKLSQDGNNRLRGLIQINGSLQVSQQPPQGPVICWERFLPVRSIKVLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVLEDPENCIGLVLTEVAMPILSGIGLLCKIMNHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHVWRRCHSSSGSGSESATNTRKSTKSRSNDASENNSDSNEENDYGSKGLSIRDGSDNGSGTQSSWTKCLAQVGSPHPLSPHKQLVDAPDSTCAQVMQTKTEKVSSRWVHATEKECLELIDHLDDVAMGKDLAVGISLSMQLEHRLEGLSSHPMGKGANKMSDDDDMQIVKGQSNACEKGELECNGGKTRTQENQTMNVIDVTDSNSPQAESRDLNTPNGFSGFSLTKENCCPKEHPSLELSLKRLGEVRDPKNVTGEECNVLRHSDQSAFSKYNTASSANQAQTRNVGSCSPLANGSAAPNAEVIHNFPSHSNVTPPNQQSNGSNNINDMASTNTYLGTKPCTFDKMPESVRGLGSFNSSERRTLPNNSKKTYAREEYMEIVRGQLGSSEHEFQAEHTHYEHHHYNHISRKAAVDLQSEHDLLLKSSTNTAQQCVSSNAFGGPAESNAANYTIDGNAGESDHGSNGHGSNGQDGTLTMRTVNMENGNVASGSFGVGGIDRKNIGNGADEGRLSLREAALTKFRQKRKERCFEKRVRYHSRKKLAEQRPRIRGQFVRRIVSETKEEKDHQSDNLVPGDHTDIPQ | 786 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun11g02040 | 786 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 88 | 421 | IPR045279 | GO:0009736 | |
Viun11g02040 | 786 | MobiDBLite | consensus disorder prediction | 761 | 777 | - | - | |
Viun11g02040 | 786 | MobiDBLite | consensus disorder prediction | 213 | 288 | - | - | |
Viun11g02040 | 786 | ProSiteProfiles | CCT domain profile. | 718 | 760 | IPR010402 | GO:0005515 | |
Viun11g02040 | 786 | MobiDBLite | consensus disorder prediction | 639 | 682 | - | - | |
Viun11g02040 | 786 | Pfam | CCT motif | 718 | 759 | IPR010402 | GO:0005515 | |
Viun11g02040 | 786 | CDD | psREC_PRR | 89 | 192 | - | - | |
Viun11g02040 | 786 | Gene3D | - | 86 | 252 | - | - | |
Viun11g02040 | 786 | ProSiteProfiles | Response regulatory domain profile. | 88 | 206 | IPR001789 | GO:0000160 | |
Viun11g02040 | 786 | MobiDBLite | consensus disorder prediction | 255 | 273 | - | - | |
Viun11g02040 | 786 | FunFam | Two-component response regulator-like PRR37 | 87 | 245 | - | - | |
Viun11g02040 | 786 | MobiDBLite | consensus disorder prediction | 761 | 786 | - | - | |
Viun11g02040 | 786 | MobiDBLite | consensus disorder prediction | 510 | 537 | - | - | |
Viun11g02040 | 786 | SMART | REC_2 | 87 | 202 | IPR001789 | GO:0000160 | |
Viun11g02040 | 786 | Pfam | Response regulator receiver domain | 89 | 200 | IPR001789 | GO:0000160 | |
Viun11g02040 | 786 | MobiDBLite | consensus disorder prediction | 213 | 248 | - | - | |
Viun11g02040 | 786 | SUPERFAMILY | CheY-like | 85 | 211 | IPR011006 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun11g02040 | Viun-Chr11 | 35893723 | 35922617 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun11g02040 | 34 | 302 | Response Regulator Gene Family | AT5G60100 | 60.932 | 7.53e-92 | 292 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Pseudo ARR-B | Viun11g02040 | Response_reg | 5e-21 | CL0304 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun11g02040 | K12129 | - | gmx:100785796 | 1045.03 |