Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02026 ATGGCCGGAGTTAATCCGAATGGCGTAGCTGATTTTCCGGCGGTTTCGACGCACGGCGGACAGTTCATTCAATACAACATATTCGGCAACCTCTTCGAGGTTACGGCGAAGTACCGTCCTCCAATCATGCCTATTGGACGCGGCGCGTATGGAATCGTTTGCTCGCTGTTGAATACGGAGACGAATGAGCTGGTGGCTGTTAAGAAGATAGCGAACGCTTTCGACAATCACATGGACGCTAAGCGAACGCTCCGTGAGATTAAGCTTCTTAAACATCTGGATCATGAAAATTACTTTTTGTATCAGATTCTTCGTGGGCTAAAGTACATACATTCTGCAAACATAATCCATAGAGATTTAAAACCGAGCAACCTGTTGCTGAATTCTAATTGTGACTTGAAGATTATTGACTTTGGTCTTGCCCGACCAACTATGGAAAGTGACTTCATGACAGAATACGTAGTCACAAGATGGTACAGGGCTCCCGAATTGTTGTTGAACTCCTCAGATTACACCTCTGCGATAGATGTTTGGTCTGTTGGTTGCATCTTCATGGAGCTTATGAATAAAAAGCCTCTCTTCCCAGGCAAAGACCATGTGCATCAGATGCGCCTATTGACAGAGCTTCTTGGTACCCCAACTGATGCTGACCTTGGGTTGGTGAAAAATGAAGACGCAAGAAGATATATTAGACAGCTTCCTCAATATCCTCGCCAACCTTTAGCTCAGGTCTTCCCCCATGTTCATCCCGCAGCCATTGATCTTATTGATAAAATGTTGACAATTGATCCCACCAAAAGAATTACAGTTGAAGAAGCGCTTGCCCATCCATACCTTGAAAAACTGCATGATGTAGCTGATGAACCAATCTGCATGGAGCCATTCTCATTTGAGTTTGAGCAACAGCCATTGGATGAAGAGCAAATAAAAGAGATGATATACAGGGAAGCATTAGCACTCAATCCTGAGCATGCATAA 978 0.4417 MAGVNPNGVADFPAVSTHGGQFIQYNIFGNLFEVTAKYRPPIMPIGRGAYGIVCSLLNTETNELVAVKKIANAFDNHMDAKRTLREIKLLKHLDHENYFLYQILRGLKYIHSANIIHRDLKPSNLLLNSNCDLKIIDFGLARPTMESDFMTEYVVTRWYRAPELLLNSSDYTSAIDVWSVGCIFMELMNKKPLFPGKDHVHQMRLLTELLGTPTDADLGLVKNEDARRYIRQLPQYPRQPLAQVFPHVHPAAIDLIDKMLTIDPTKRITVEEALAHPYLEKLHDVADEPICMEPFSFEFEQQPLDEEQIKEMIYREALALNPEHA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02026 325 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 97 - -
Viun11g02026 325 ProSiteProfiles Protein kinase domain profile. 1 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02026 325 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
Viun11g02026 325 Pfam Protein kinase domain 99 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02026 325 Pfam Protein kinase domain 44 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02026 325 SUPERFAMILY Protein kinase-like (PK-like) 44 287 IPR011009 -
Viun11g02026 325 SMART serkin_6 39 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g02026 325 FunFam Mitogen-activated protein kinase 77 306 - -
Viun11g02026 325 Gene3D Phosphorylase Kinase; domain 1 16 96 - -
Viun11g02026 325 ProSitePatterns Serine/Threonine protein kinases active-site signature. 115 127 IPR008271 GO:0004672|GO:0006468
Viun11g02026 325 FunFam Mitogen-activated protein kinase 24 115 - -
Viun11g02026 325 Gene3D Transferase(Phosphotransferase) domain 1 97 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02026 Viun-Chr11 35769367 35772814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02026 10 325 MAP Kinase Gene Family AT3G45640 73.481 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Viun11g02026 Pkinase 3.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02026 K20536 - gmx:100801339 624.78