Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02021 ATGAACTCTAACAGTGAGAAACTTCGGCAATCATATAATGAACTGCTGGAGTTCAAGATTGTATTAGAAAAGGCATGTAGTTTTCTTGTTTCAAGCCATGGTGCTGTCATTTCAGAAGAGCGAGAATTGAAGGAGAATGTTTTCTCAATTGGAAACTATGTCGAGACGCCATTTTTATATGAACAGGAAATGACGCCTGCACCATCAAATCATTCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAGGTTCTTAGATTTGAAAGGATGTTGTTTCGAGCGACAAGAGGGAATATGCTTTTCAATCAAGCACCAGCTGATGAACAAATCATAGATCCTATTTCAAATGAGATGGTTGAGAAAATTGTCTTTGTTGTGTTCTTCTCTGGGGAGCAAGCAAGAACAAAGATCCTGAAAATTTGTGAAGCATTTGGTGCAAATTGTTACCCTGTCCCTGAAGATATAAGTAAGCAGAGGCAAATAACATCAGAGGTTTCGGCTCGCCTTGCAGACTTAGAGACAACTCTAGAAGCTGGAATTAGGCATCGGAACAAGGCTCTAGCTTCTGTTGGAGGCCCTTTAACAATATGGATGGAGATGGTAAGAAGAGAGAAGTCTGTGTATGATACACTGAACATGTTAAACTTTGATGTCACAAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCTGTATTTGCAAAAACGCAGATTCAGGAGGCACTGCAACGTGCAACTTTTGACAGCAATTCTGAGGTTGACATAATCTTTCATTCAATGGATGCACTGGAATCACCACCTACATATTTTAGGACCAACAATTTCACAGGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCTGCAGTTTATACAGTTATTACATTCCCTTTTCTTTTTGCGGTGATGTTTGGCGACTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCATTGGTTCTTATAGCACGTGAGAGCAAGCTCAGCACCCAGCGACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGCTACTTTTGATGTCACTATTTTCTATTTATTGTGGGTTAATATACAATGAATTCTTCTCTGTTCCTTATCACATATTTGGTGCCTCTGCTTACAAATGCCGAGATAATACATGCAGGGATGCACGTACTACTGGCTTAGTAAAATATCGAGAACCATATCCATTTGGTGTGGATCCCAGCTGGCGAGGAAGTCGATCAGAATTGCCTTTTCTAAACTCTCTCAAGATGAAGATGTCCATTCTGTTTGGTGTGGTGCACATGAACTTGGGAATTATATTAAGTTATTTCAATGCTCATTTCTTTGGCAGCTCACTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTTAATTGTTTATTTGGGTATCTTTCCCTTCTCATCATTGTGAAGTGGTGCACTGGCTCTCAGGCAGATCTTTATCATGTAATGATTTACATGTTTTTAAGCCCTTTCGACAATCTTGGTGAGAATCAATTGTTCTGGGGCCAAAGACCACTTCAAGTTGTGTTGTTGCTTTTGTCTGTAATTGCAGTTCCGTGGATGCTCTTTCCAAAACCTTTTATGCTAAAGAAGCTTCATAATGAGAGATTTCAAGGACGCACTTACGGTGTGCTTAATTCCTTTGAGGTTGATCTTGAGATGGAACCAGGTTCTACCAGACAACATGACGATGAGTTCAATTTCACAGAAGTCTTCGTTCACCAAATGATTCACTCCATTGAGTTTGTTCTAGGTTCAGTTTCAAATACGGCCTCATATCTACGACTTTGGGCATTAAGCTTGGCTCACTCAGAACTTTCTACTGTTTTTTATGAGAAAGTCCTGCTACTTGCTTGGGGGTATGACAATCTTATCATTCGGTTACTGGGACTAGCTGTCTTTTCCTTTGCAACTGCTTTTATACTATTAATGATGGAGAGTCTCAGTGCTTTTCTTCACGCCTTGCGTCTTCACTGGGTGGAATTTCAGAACAAATTTTACCATGGTGATGGATATAAGTTCAGGCCTTTTTCCTTTGCTTCCTTAACAGAGGATGAAAATTGA 2112 0.4015 MNSNSEKLRQSYNELLEFKIVLEKACSFLVSSHGAVISEERELKENVFSIGNYVETPFLYEQEMTPAPSNHSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPADEQIIDPISNEMVEKIVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKQRQITSEVSARLADLETTLEAGIRHRNKALASVGGPLTIWMEMVRREKSVYDTLNMLNFDVTKKCLVGEGWCPVFAKTQIQEALQRATFDSNSEVDIIFHSMDALESPPTYFRTNNFTGPYQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALVLIARESKLSTQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPYHIFGASAYKCRDNTCRDARTTGLVKYREPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVVHMNLGIILSYFNAHFFGSSLDIRYQFVPQMIFLNCLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPFDNLGENQLFWGQRPLQVVLLLLSVIAVPWMLFPKPFMLKKLHNERFQGRTYGVLNSFEVDLEMEPGSTRQHDDEFNFTEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLIIRLLGLAVFSFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTEDEN 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02021 703 PIRSF ATP6V0A1 1 703 IPR026028 GO:0000220|GO:0046961
Viun11g02021 703 Pfam V-type ATPase 116kDa subunit family 1 695 IPR002490 GO:0033179|GO:0046961|GO:1902600
Viun11g02021 703 PANTHER VACUOLAR PROTON ATPASES 1 701 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02021 Viun-Chr11 35749233 35758743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02021 1 696 Primary Pumps ATPases(2) AT2G28520 79.828 0.0 1146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02021 K02154 - gmx:100800799 1310.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03453 5 44578007 44588957 Viun11g02021 11 35749233 35758743 PCT