Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01990 ATGGGAAAGAAGAAGCAGAAAGTCGTTCTTCCACCGGAGCTTCCGCCGGAGATTCCAGACGACGAGGTTGAGGTTTCCGATGAAGACCTCCAATTCATCAAAGAGAATCGCAACTATGCCTCCTTGCTCTCCACCTTGGACACCCATTCAATCACCAAGCATGTTACGCGGGTTGCTGATGCCAAAGACGATGCATTGGAGAAACTTTATGAGAAACGCATGCAGAAAAATGCTCTCAAGAAAGAAAAAGAAGAAACTGGTTTGCAGGTTGATCGTGTTGATGCTCTTCCAATCAAGACATTGGATGGAAAACTCCATTACCGGACAGCTTCAAAGACCGTATCAGAAAATGATCTTAGTGAAGAGGGAACTGCAGAGGATACCAATATGGATGAAGGTATGGTGAAGCTAACTAAGGCTGAAAAGAGAGCCAAACTTAAGAAAATGAAGAAAGAGGCCAAAAAACAAGGGAAAGAAATGGCTAAAGCAGAAGTGGAGGAGACACCACATGCAGCAGTGCTGGCTGAGGTAAAGGAAGATCTTACAGCTGAGCAGACATTTGAAAGCAAGAAGTGTAAACTTGCAGAATTAGGGAATGCCTTGCTTACAGATCCAGAGTCCAACATTAAATTACTGAAAGAGATGGTGCAATTATCTAAAGATGACGACCATACCATTGTTAAGCTTGGACTTCTATCCCTCTTGGCAGTTTTCAAAGATATTGTCCCTGGTTATCGGATCAGGCTTCCTACTGAAAAGGAATTAGAGATGAAGGTTTCAAAGACTGTTAGAAAGATGCGTTATTATGAGTCTACTCTTCTTTCAGCATACAAGGCATATTTGCAAAGGCTGGTAATCTTAGAGAAGAAGCCTTTATTTCAACATGTAGCAGTTCGTTGTATTTGTTCTTTGCTTGATGCAAATCCCCATTTCAACTTTCGTGAAAGTTTGTTGGAGGCTACTATCAGAAACATAGGCTCTACTGATGAGGCTATAAGGAAACTTTGTTGTTCCACGATTAAATCACTCTTTACAAATGAGGGTAAACATGGGGGTGAAGTGACTGTTGAGGCAGTTCGATTGATTGCCGATTATGTTAAAGCTTACAACTGCCAAATGCACCCAGATTCTGTTGATGTTTTCTTGTCCCTTTCATTTAATGAGGATCTCTTGAAGTCTGGAAAGACAGAAGAGGATCAGAAATTAAAAGATAAGAAAAGTAAGAAAAGGAAACACTCTGAGGCATCAAATCAGTTGACGGAGAATGATAGAAAGAAAAGTAGGCAAGAATTGATTTCTAAGACGAGAGAGGAGGTTGAAGCTGATTACAAGGCTGCATCCTTTGCCCCGGATGTTATGGAGAGGAAACAGATGCAAACTGAAACACTCTCTGCTGTCTTTGAGACATACTTTCGTATTTTGAAGCATACAATGCAGTCCATCGGTGCCAGGCCTGAAGCTAACGCTGGGGCATTATCTGCTGCAGTGGAACCCCTCCCTTTACTTGCTCCTTGTCTGAAAGGACTGGCAAAATTCTCACATCTGATTGACCTTGATTTCATGGGTGATCTAATGAACCATCTGAAAGTACTTGCTTCTGGAAGTAGCAATTCAGGCAACACTTCTGACAAGTCTTCTAAATGTTTGACTGTATCGGAACGTCTCCAATGCTGCATTGTTGCTTTTAAAGTGATGAGGAACAATCTTGATGCCCTGAATGTTGATTTACAGGACTTCTTTATCCATCTTTACAATCTTGTTCTTGAATACAGGCCAGGAAGAGATCAAGGAGAGGTGTTGGCAGAAGCTTTGAAGATAATGTTGTGCGATGATAAGCATCATGACATGCAAAAGACTGCTGCATTTATAAAACGATTAGCAACATTTTCACTGTCTGTTGGATCAGCAGATTCCATGGCTGCCTTGGTCACAGTAAAGCATCTCCTTCAGAAGAATGTCAAGTGCAGAAATTTGTTGGAAAATGACATTGGAGGAGGCTCTGTTTCTGGCACAATTCCTAAATATCTACCATATTCCACAGATCCCAATTTAAGTGGTGCCCTTGCCTCGGTACTTTGGGAACTCAATATTTTGTCCAGCCATTATCATCCATCTATATCGACATTGGCCTCAGGCATTTCAAGCATGAGTACTGCACATAACCAGGTCCTTTTATCAAAGTCCTCTCCTCAACTAGCTTTTAAGGAAATGTCTCTGGACCAAGAATTATGTTTCACACAACAAAGTGGCAGTATAAAATTAAAGAACAAGAGACGAACAAATGGCCCTGCTGCATCACTTTCCATTGGTTCTACAACTGTTAAGAGCTCATTTGATGACAATGAGTTGCAGAGGAAACTTATTTCCCATTTTATGGTTCATCATGACATCAAGGAAAATGAAAGGTTGAGAAAAGAGCTGGACAGGACTGCATCATCGCTGCAGCTATATGAACAATATAAGAAACAAAAGAAACTATCAAAGCCAAGGAGATGA 2496 0.4115 MGKKKQKVVLPPELPPEIPDDEVEVSDEDLQFIKENRNYASLLSTLDTHSITKHVTRVADAKDDALEKLYEKRMQKNALKKEKEETGLQVDRVDALPIKTLDGKLHYRTASKTVSENDLSEEGTAEDTNMDEGMVKLTKAEKRAKLKKMKKEAKKQGKEMAKAEVEETPHAAVLAEVKEDLTAEQTFESKKCKLAELGNALLTDPESNIKLLKEMVQLSKDDDHTIVKLGLLSLLAVFKDIVPGYRIRLPTEKELEMKVSKTVRKMRYYESTLLSAYKAYLQRLVILEKKPLFQHVAVRCICSLLDANPHFNFRESLLEATIRNIGSTDEAIRKLCCSTIKSLFTNEGKHGGEVTVEAVRLIADYVKAYNCQMHPDSVDVFLSLSFNEDLLKSGKTEEDQKLKDKKSKKRKHSEASNQLTENDRKKSRQELISKTREEVEADYKAASFAPDVMERKQMQTETLSAVFETYFRILKHTMQSIGARPEANAGALSAAVEPLPLLAPCLKGLAKFSHLIDLDFMGDLMNHLKVLASGSSNSGNTSDKSSKCLTVSERLQCCIVAFKVMRNNLDALNVDLQDFFIHLYNLVLEYRPGRDQGEVLAEALKIMLCDDKHHDMQKTAAFIKRLATFSLSVGSADSMAALVTVKHLLQKNVKCRNLLENDIGGGSVSGTIPKYLPYSTDPNLSGALASVLWELNILSSHYHPSISTLASGISSMSTAHNQVLLSKSSPQLAFKEMSLDQELCFTQQSGSIKLKNKRRTNGPAASLSIGSTTVKSSFDDNELQRKLISHFMVHHDIKENERLRKELDRTASSLQLYEQYKKQKKLSKPRR 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01990 831 MobiDBLite consensus disorder prediction 1 21 - -
Viun11g01990 831 Pfam CBF/Mak21 family 555 710 IPR005612 -
Viun11g01990 831 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 818 IPR016903 -
Viun11g01990 831 Pfam Nucleolar complex-associated protein 190 280 IPR011501 -
Viun11g01990 831 PIRSF Noc3 1 814 IPR016903 -
Viun11g01990 831 Coils Coil 66 86 - -
Viun11g01990 831 MobiDBLite consensus disorder prediction 395 429 - -
Viun11g01990 831 MobiDBLite consensus disorder prediction 411 429 - -
Viun11g01990 831 SUPERFAMILY ARM repeat 203 614 IPR016024 -
Viun11g01990 831 Coils Coil 402 422 - -
Viun11g01990 831 Coils Coil 139 166 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01990 1 807 Core DNA Replication Machinery Family AT1G79150 58.080 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01990 K14834 - gmx:100776136 1324.69