Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01912 ATGAAGCCACAGCTCAAAATTGCTCTTGCTTTAGTTATTAGCTTGCTTTGGATTCAGAGCTCATTTTGTGATGAAGCTTCTGATAACCTAAACAAGTGGAGATGCAGATGTTCTTTTGGAGGGAATCAGAGTTTCTCTCTGGCTAACTGTTCTAAGTCATGTGATTGCCACTCAGATGCTGAAGAAAGTGCATCCGTATGGACATGCACATGCGATTCAAATGGGTTTCCCCAAGTGGCAGCAGATGGTCATAGCCCTAATTGCTTTAAAGCTTGCAACTGCACTTGGGGAACTGTCAGCAATCGGGGAGGTTCAAAGAAACGTGTTTCCATCAAGATTGTTGTAGTTATCCTATTAATATGTGTTATATGCACAACCATGGCGTTTCTTGTCTCACTCTTATGCCATGTATACAGAAGGGACAGATGTACTATTCAATCACCCATATTCTCAACATATAAGGAAACAAGTAGTGGTAGTACCACCAACTTAATTAGTCATAGGTCAGGGGCTTCCTCAGTGCCAGAAACAAAATTTGCAATAAATTCTCCAATTTGTCATATTACAGGATGCTTTCAGAAAGCCTCTTTCTTATTTGGGAGCCCAAAAGAAACTTACCATGGAAATATTTTTCCATTTTCCTTAGCTGAACTGGAAAATGCTACTGAAAACTTTTCATCTTCCAACCTGATTGGACTAGGCGGAAGCAGTTATGTATACCATGGTCGTCTGAAAGATGGTAGCAATGTGGCGGTTAAACGACTAAAAGATCAAGGAGGGTCAGAAGCAGACTCTGCATTTTTCAAGGAGATTGAATTATTATCTAGACTTCATCATTGTCATTTGGTGCCTTTGCTAGGATACTGTTCAGAGTTAAAAGGAAAACATGTTCAGAGGTTACTTGTATTTGACTACATGGCTAATGGAAATTTGAGGGATTGTTTAGATGGAGTTTCAGGAAAACATGTAGATTGGGCTACTCGTGTCATGATTGCGTTAGGAGCTGCAAGGGGCTTGGAGTATCTCCATGAAGCAGCTGCTCCAAGAATTCTTCATAGAGATGTCAAATCAACTAACATTCTTCTGGATGAAAATTGGCAAGCAAAAATAACTGATCTTGGCATGGCTAAAAACCTGAGATCTGATGACCTCCCTAGCTGTTCAAATTCTCCAGCAAGAATGCAGGGTACATTTGGCTATTTTGCACCTGAGTATGCCATTGTTGGTAGAGCTTCTCTTGAGTCAGATGTCTTTAGTTTTGGTGTGGTTCTTCTTGAGCTTATCAGTGGCCGCCAACCCATCCATAAATCTACTGGCAAAGAAGAAAGCCTTGTTATATGGGCTACTCCTCGCTTACAGGATAGTAGGCGAGTAATAATGGAGCTGGTTGATCCACAATTAAAGGGAAATTTTCCAGAAGAAGAGGTGCAGGTGATGGCATACTTAGCAAAGGAGTGTTTGCTGCTAGATCCTGACACTCGACCAACCATGAGTGAGGTTGTTCAGATTCTTTTAAGTATTTCCCCAGGAAAATCTAGGAGGAGAAGAAACATTCCAGGCACCCTCTTTCAGGAAACGCAGGATGAAGAAAAGCAAAGGCAAGGCACACCCAGTAAAATATTTATTGATCATAATGTTTCTGTTAAGAACAAAAGTAAAGAAGCAGATCCAGTTTCAGGTGAGTGTATGGAGAGTTTGATCCTCTTGGCTTCAAAATCTGATGGCTCTTGTGTATCAGAAGAGGAAATGGTAGACCTAACTGAGCCTAGGTTTGAATCCTTTTGCATCACCACTGCCAAAGCCCCTTGA 1809 0.4118 MKPQLKIALALVISLLWIQSSFCDEASDNLNKWRCRCSFGGNQSFSLANCSKSCDCHSDAEESASVWTCTCDSNGFPQVAADGHSPNCFKACNCTWGTVSNRGGSKKRVSIKIVVVILLICVICTTMAFLVSLLCHVYRRDRCTIQSPIFSTYKETSSGSTTNLISHRSGASSVPETKFAINSPICHITGCFQKASFLFGSPKETYHGNIFPFSLAELENATENFSSSNLIGLGGSSYVYHGRLKDGSNVAVKRLKDQGGSEADSAFFKEIELLSRLHHCHLVPLLGYCSELKGKHVQRLLVFDYMANGNLRDCLDGVSGKHVDWATRVMIALGAARGLEYLHEAAAPRILHRDVKSTNILLDENWQAKITDLGMAKNLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPIHKSTGKEESLVIWATPRLQDSRRVIMELVDPQLKGNFPEEEVQVMAYLAKECLLLDPDTRPTMSEVVQILLSISPGKSRRRRNIPGTLFQETQDEEKQRQGTPSKIFIDHNVSVKNKSKEADPVSGECMESLILLASKSDGSCVSEEEMVDLTEPRFESFCITTAKAP 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01912 602 FunFam receptor-like serine/threonine-protein kinase NCRK 199 305 - -
Viun11g01912 602 ProSitePatterns Protein kinases ATP-binding region signature. 231 253 IPR017441 GO:0005524
Viun11g01912 602 PANTHER OS01G0750732 PROTEIN 70 527 - -
Viun11g01912 602 SMART serkin_6 225 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01912 602 Gene3D Phosphorylase Kinase; domain 1 200 305 - -
Viun11g01912 602 FunFam receptor-like serine/threonine-protein kinase NCRK 306 516 - -
Viun11g01912 602 MobiDBLite consensus disorder prediction 511 538 - -
Viun11g01912 602 CDD STKc_IRAK 231 507 - -
Viun11g01912 602 SUPERFAMILY Protein kinase-like (PK-like) 205 504 IPR011009 -
Viun11g01912 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Viun11g01912 602 Gene3D Transferase(Phosphotransferase) domain 1 306 524 - -
Viun11g01912 602 Pfam Protein kinase domain 227 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01912 602 ProSiteProfiles Protein kinase domain profile. 225 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01912 Viun-Chr11 35010777 35016426 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01912 1 600 Receptor kinase-like Gene Family AT2G28250 51.650 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Viun11g01912 Pkinase 6.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01912 - - gmx:100817870 1074.31