Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01870 ATGGCAACCACAGCTTCCTTACTTCGCCTTTCTCGTCTCCGATTCATCGCCAATTCCCAACCCCTTCTATCTCCTTTTTCAATCCCATCCTATTTCCCTCTCACCCCCAAAACCAAGAAACCGACTCGATTGCGGTTCTTCTCCATGGCTGCGGAACCCAAGGAATCGCCCGCCAACAACCCCGGTTTGCATACAACTCCGGACGAAGCTACCAAGGGTTACATTATGCAACAAACTATGTTCCGAATCAAAGACCCCAAAGTGAGCCTTGATTTCTATTCTCGCGTCTTGGGCATGTCTTTGCTTAAGAGGCTGGATTTTCCGGAGATGAAGTTCAGCCTGTACTTTTTGGGCTATGAGGATACGTCAAAAGCTCCAAGTAATCCAGTTGATAAAACGGTTTGGACCTTTTCTCAGAAGGCTACAATTGAACTGACACATAATTGGGGTACTGAAAGTGATCCAGAGTTCAAAGGATACCACAATGGCAATTCTGAACCTCGCGGCTTTGGACACATTGGCATAACTGTTGATGACACAGTAAAGGCATGTGAAAGATTTCAGAATCTGGGAGTTGAGTTTGTTAAGAAACCAGATGACGGGAAAATGAAAGGTATAGCATTTATCAAGGATCCTGATGGATACTGGATTGAAATCTTTGATCTAAAAAGAATAGGAACTGTGACTCAAAGTTCTTCTTAG 702 0.4416 MATTASLLRLSRLRFIANSQPLLSPFSIPSYFPLTPKTKKPTRLRFFSMAAEPKESPANNPGLHTTPDEATKGYIMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTSKAPSNPVDKTVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGITVDDTVKACERFQNLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKRIGTVTQSSS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01870 233 FunFam Lactoylglutathione lyase 47 229 - -
Viun11g01870 233 ProSitePatterns Glyoxalase I signature 1. 78 99 IPR018146 GO:0004462|GO:0046872
Viun11g01870 233 ProSitePatterns Glyoxalase I signature 2. 163 179 IPR018146 GO:0004462|GO:0046872
Viun11g01870 233 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 78 219 IPR004360 -
Viun11g01870 233 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 75 222 IPR037523 -
Viun11g01870 233 NCBIfam lactoylglutathione lyase 76 223 IPR004361 GO:0004462|GO:0046872
Viun11g01870 233 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 65 221 IPR029068 -
Viun11g01870 233 CDD GlxI_Zn 76 220 - -
Viun11g01870 233 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 37 227 - -
Viun11g01870 233 Gene3D - 50 228 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01870 Viun-Chr11 34583852 34589485 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01870 13 233 Calmodulin-binding Proteins AT1G08110 74.324 5.62e-114 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01870 K01759 - gmx:100779383 422.55