Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01843 ATGGCGGTCGTTGGCGGCGGCGATGGCGGTGGCCGTTTCAGAACCACCATTGTGCCGCCTAATTCTGTTGTCTTCTTGAACCAATGGTGGCTTGTGAAGCATCCCAACGGTCTAGGCATTGGAGGGGTTTCTTCCGTCGGCAGAGACAGAGAAAGAGCGTTTGCGTCCACCGTCATTACGGTGAGAGAAGAAGCCAATGTCGTAGGTACTCACGATGGAGTCACTATTGTTTTCCGTGGTTTCATCAACACCTCTCGTTCATCTCACTTTGGCGTCCCCTTAGAGGTTTCTCAACGCTTCCTCGTTGGATTTCCATACGATTGGAGCAAGTATTCTTCAATTGATAACATGAAATGTGAATCTAACAACAGTGAAAAAGGAATCCCAGTTGAAGCCCAAGCCAATGTTGAACGCCAAGCCAATGTTGAAAGCCAAGCCAATGTTGAAAGCCAAGCCAGTGATGAATCCTCGAACGGTATGTATGATTCCACAGGCCCTTCTGGAAAAAACATCCTTAAAACTCAAACTTCGGCCAAGAAAAGGAAAGCTGATAGACAAAAGATAGGGCATGATGCTAACAACTTAGTTAGTAGGAGGGTAACGAGAAGCATTTCCAAAAATAGTGAATCAATGCCCAAAGAAGACGGGAAAGCTCCAATAGCTGATGTTTTTTCTCCAGTTAGGAGATCTCCTAGGCTATATAGTCGTAAATAA 714 0.4566 MAVVGGGDGGGRFRTTIVPPNSVVFLNQWWLVKHPNGLGIGGVSSVGRDRERAFASTVITVREEANVVGTHDGVTIVFRGFINTSRSSHFGVPLEVSQRFLVGFPYDWSKYSSIDNMKCESNNSEKGIPVEAQANVERQANVESQANVESQASDESSNGMYDSTGPSGKNILKTQTSAKKRKADRQKIGHDANNLVSRRVTRSISKNSESMPKEDGKAPIADVFSPVRRSPRLYSRK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01843 237 MobiDBLite consensus disorder prediction 141 174 - -
Viun11g01843 237 MobiDBLite consensus disorder prediction 177 192 - -
Viun11g01843 237 MobiDBLite consensus disorder prediction 141 237 - -
Viun11g01843 237 Pfam SANTA (SANT Associated) 24 111 IPR015216 -
Viun11g01843 237 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 24 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01843 Viun-Chr11 34438019 34439214 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun11g01843 SANTA 4.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01843 - - vra:106755867 301.982