Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01820 ATGGAATTGATGTTGGTGCCTCCACCATGGCTGGAACAACTCTTGTCCACCACATTCTTCACCATGTGCGAAACTCACATCAACACACCCAAAAACGAATGCAACATGTATTGCCTCGATTGCAAGGATCAATCATTCTGTTTCTATTGCAAACAATCTTGGCACAAGGATCATCAAGTAATTCAAATAAGGAGATCTTCGTATCATGATGTTGTGAGGGTATCAGAGATTCAGAAAGTTTTGGATATCAGTGGAGTTCAGACTTATGTTATCAACAGTGCTAGAGTTATTTTTCTGAATGAGAGGCCTCAGAATCAATCAAAAACCAATAACATGGTTGGTGGTGGAAAAAACAACTCTCATTTGTGTGAAATTTGCAGAAGGAATCTCTTAGATCCTTTTCGTTTCTGTTCTTTAGGATGCAAGGTTGTAGGAACAAAGAAGAATGGGAATGCGAGTTTTGTCTTAAGCGCAAAGAAAGACGAAGAAATAGGGAGAATGCATGAAGGAATGCGAAGAAGGTTGCCATCAAAGGAAGAATTGCGTGAAGGAATCCACAAACAAGTGTACCAAAACACGTCTTCTAATTCACATATAAGGCCAACCCTACAACATGGTTGTTCAAATTCAAGGAGAAGAAAAGGGGTACCTCATAGGGCACCTTTAGGTCCATAA 675 0.3985 MELMLVPPPWLEQLLSTTFFTMCETHINTPKNECNMYCLDCKDQSFCFYCKQSWHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVIFLNERPQNQSKTNNMVGGGKNNSHLCEICRRNLLDPFRFCSLGCKVVGTKKNGNASFVLSAKKDEEIGRMHEGMRRRLPSKEELREGIHKQVYQNTSSNSHIRPTLQHGCSNSRRRKGVPHRAPLGP 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01820 224 MobiDBLite consensus disorder prediction 191 224 - -
Viun11g01820 224 SUPERFAMILY B-box zinc-binding domain 20 65 - -
Viun11g01820 224 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 222 - -
Viun11g01820 224 Pfam PLATZ transcription factor 64 143 IPR006734 -
Viun11g01820 224 MobiDBLite consensus disorder prediction 191 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01820 Viun-Chr11 34282655 34284448 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Viun11g01820 PLATZ 1.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01820 - - gmx:100787414 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01820 11 34282655 34284448 Viun11g01820 11 34282655 34284448 ECH