Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01810 ATGGAGAGAAACGAAAACTACAGTTCAGAGGAGGAATGCATGGAGGATTACAGGCGTGGAGGGTACCATGCCGTTAGAATCGGCGATGCTTTCAACGATGGCCGTTACGTCGTGCAGTCCAAGCTCGGTTGGGGTCATTTTTCCACTGTCTGGCTCGCTTGGGACACTCTCGTCTCGCGTTTTGTTGCCCTTAAAATTCAAAAGAGTGCGCAACATTACACTGAAGCTGCAATGGATGAAATAAAGATTCTAAAACAAATAGCCGAGGGGGACCTGGAAGATAAGAAATGTGTTGTGAAGCTTTTGGATCATTTTAAGCATTCGGGGCCTAATGGACAGCATGTGTGTATGGTTTTTGAATTCCTGGGTGACAATCTTCTCACCCTTATTAAATATACTGACTATCGTGGGATTCCACTCCACATGGTTAAAGAAATCTGTTTTCATATATTGGTGGGCTTAGATTACTTGCATCGTGAGCTTTCTGTTATACACACTGATTTGAAGCCAGAAAATGTGTTGCTTCAGTCACTGATAAATCCATCCAAAGATCCTAGGAAATCAGGTGCTTCACTCATCCTTCCGAATACCAAGGATAAGGCTGCGTCTAAGAATGGGACTTACCAAGACAGTAAAATTTTGAATGGAGATCCACTGAAGAACCAGAAAAAGAAAATGAAGAGGAAGGCTAAGGTAGCTCAAGGCTTTGTTGGGAGGGAAACTTCAGAGGAAGCTGAGGATTATAAAGGACCTGAGCAAGAAGATTGTGGCAATGATGTAAAATCAAGTGTTGAACCTGTTGAAGATAAACCTGATAGTTCTCTGAGTAAAGATGAATCAACAAAGAATTTTGAAAAGGATGCTTCACAAGGAAGTCATAGTCATACGAGTAGCAGCCGGTCCATGAAAAAGAAATTGCTTGCAGCTGTTGATCTTAGGTGCAAGCTGGTTGATTTTGGTAGTGCTTGTTGGACTTACAAACAATTCACAAATGATATTCAGACAAGGCAATATAGGTGTCCTGAGGTTCTTCTTGGATCCAAATACTCAACCCCAGCAGATTTATGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACCGGTGATGTTCTTTTTGATCCTCACAGCGGTGACAACTATGATAGAGATGAGGACCATCTGGCATTGATGATGGAGCTTGTTGGGAAGATACCTCCAAAGATTGCACTAGGTGGCCGCTATTCTCGAGAATTTTTCAATAGACATGGTGACTTGAGGCACATAAGCAATTTGAGATTCTGGCCAATGGATAAGGTGCTGATGGACAAGTATAATTTCAGTGAGCAAGACACAAAGGACATGGTTGACTTCCTTGTTCCAATACTTGATTTCGTCCCAGAAAAGAGACCAACAGCTGCTCAGTGCCTTAGTCATCCATGGTTGAACGCAGGCCCTCGTACTCTTCAGCCCTCAATAACTTCCACTCAACCTGATGCCATCAATGAGGAATTGTCTGAAAGAAGGAAAAAAGAAGCTGCTGAAAAAGAGTCAGTGGAAATTGGTTTGAGGAATATAGCCATTAAAGGAACTTCTGAGCCTCTCAAAGACACCCAACCTCTAAAATCATCCAAATAG 1614 0.4257 MERNENYSSEEECMEDYRRGGYHAVRIGDAFNDGRYVVQSKLGWGHFSTVWLAWDTLVSRFVALKIQKSAQHYTEAAMDEIKILKQIAEGDLEDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYTDYRGIPLHMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLQSLINPSKDPRKSGASLILPNTKDKAASKNGTYQDSKILNGDPLKNQKKKMKRKAKVAQGFVGRETSEEAEDYKGPEQEDCGNDVKSSVEPVEDKPDSSLSKDESTKNFEKDASQGSHSHTSSSRSMKKKLLAAVDLRCKLVDFGSACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELVGKIPPKIALGGRYSREFFNRHGDLRHISNLRFWPMDKVLMDKYNFSEQDTKDMVDFLVPILDFVPEKRPTAAQCLSHPWLNAGPRTLQPSITSTQPDAINEELSERRKKEAAEKESVEIGLRNIAIKGTSEPLKDTQPLKSSK 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01810 537 Gene3D Phosphorylase Kinase; domain 1 12 118 - -
Viun11g01810 537 SMART serkin_6 36 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01810 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Viun11g01810 537 MobiDBLite consensus disorder prediction 198 216 - -
Viun11g01810 537 ProSiteProfiles Protein kinase domain profile. 36 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01810 537 CDD STKc_SRPK 25 474 - -
Viun11g01810 537 FunFam CMGC/SRPK protein kinase 22 121 - -
Viun11g01810 537 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 7 498 - -
Viun11g01810 537 ProSitePatterns Protein kinases ATP-binding region signature. 42 65 IPR017441 GO:0005524
Viun11g01810 537 Pfam Protein kinase domain 311 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01810 537 Pfam Protein kinase domain 36 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01810 537 FunFam Serine/threonine-protein kinase SRPK-like protein 304 474 - -
Viun11g01810 537 Gene3D Transferase(Phosphotransferase) domain 1 119 475 - -
Viun11g01810 537 MobiDBLite consensus disorder prediction 240 289 - -
Viun11g01810 537 MobiDBLite consensus disorder prediction 184 300 - -
Viun11g01810 537 SUPERFAMILY Protein kinase-like (PK-like) 32 486 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01810 Viun-Chr11 34115332 34119324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01810 6 523 EF-hand Containing Proteins AT5G22840 66.475 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Viun11g01810 Pkinase 1.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01810 K08832 - gmx:100790060 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03305 5 43495105 43500383 Viun11g01810 11 34115332 34119324 PCT