Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01802 ATGGCAGAAACAGCAGGGGGAAGCTTCATACCTCACGTGCTCACTGTGCAAATTGGAGAGAATTTGGTTGGAACGATAATGTCATTTTTTGAGAAAGGCCCTCTATCGGTTTGCATACTTTCTGCTACTGGTGCTATTTCAAACGTCACCATTCGTGAACATGCTGGTTCCAATCATATTATGAGATTTGAGGGTACCTTTGAGATATTGTCATTATCAGGAGCTTGCACCTTCGTTGGTGGTATTAATGGTCCAGTTCGTACAAGTGGATCGTTGAGCATTTCAATGGCTAAATCTGATGGAAATGTTTTGGGGGGAATTCTTGAGAGTGCATTGGTAGCATCTTGCCCTATTCAGCTTGTTATGGCCACTTTCAAGCAAAACATCAACAGTCAATTCAAGAGGAAACAATTGTTAGAATTTTCTAATGGCCCCCTTATGCTGGAAAGTCCAGATTCAGAAAGAGGTAAAACGAAAGTTCAAAAGTTGACAGAAGGAGACAAAAATTGTTCTTCACCACCACCAACAGAACTTGGTCCAACAACAGTATCTAATGGCGTAGCAGATAACGTGTTCTCTATTACACCTAATGGTATAGCGGATAATGTGTTTTCTGCTACATCAAATGGTGTAGTAGATAATGTGTTTTCTGCTACACTTAACGGAGTAGCAAATAATGTGTTTTCTATTACATCTAATGGAGTAACAGATGACGTGTTCTCTGTTACACCTAATGGAGTAACAAATAACGTGTTTTCTGTTACTCCTGATAGAGTAGCAGATATTACTGTTACTCCACACAATGTGCACTCTGCATGTATTATTGGTGTTGATATGGATCACCAGGCACCGCAATCTGCATCAGATGATTCAGATCGGAAGACTTCTGCAGAAGTGAATGCAAATGTTATGGAGTTATGA 921 0.4007 MAETAGGSFIPHVLTVQIGENLVGTIMSFFEKGPLSVCILSATGAISNVTIREHAGSNHIMRFEGTFEILSLSGACTFVGGINGPVRTSGSLSISMAKSDGNVLGGILESALVASCPIQLVMATFKQNINSQFKRKQLLEFSNGPLMLESPDSERGKTKVQKLTEGDKNCSSPPPTELGPTTVSNGVADNVFSITPNGIADNVFSATSNGVVDNVFSATLNGVANNVFSITSNGVTDDVFSVTPNGVTNNVFSVTPDRVADITVTPHNVHSACIIGVDMDHQAPQSASDDSDRKTSAEVNANVMEL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01802 306 MobiDBLite consensus disorder prediction 165 182 - -
Viun11g01802 306 CDD DUF296 11 125 IPR005175 -
Viun11g01802 306 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 4 174 IPR039605 GO:0003680
Viun11g01802 306 Gene3D - 11 142 - -
Viun11g01802 306 ProSiteProfiles PPC domain profile profile. 6 146 IPR005175 -
Viun11g01802 306 MobiDBLite consensus disorder prediction 282 306 - -
Viun11g01802 306 SUPERFAMILY AF0104/ALDC/Ptd012-like 8 130 - -
Viun11g01802 306 MobiDBLite consensus disorder prediction 163 182 - -
Viun11g01802 306 Pfam Plants and Prokaryotes Conserved (PCC) domain 11 126 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01802 Viun-Chr11 34028282 34030826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01802 4 151 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 40.940 3.29e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01802 - - vun:114168233 603.208