Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01782 ATGGACGCAGAGGATCTAGCCGACGACCTTCACAGTCTCAGCTTCGCTTCCACCAACACCACCAAACGCAGCACAAGTTTCAGCTCCGAAACAACCACCGTCACGCCCTCCACCTCCTCCCACTTCCTCCACGCGCCACTCCCTAACGCCAAGCCGCACGCGCCATCCTCCGACCCCTGCGCCTCTTTCATCCACCGTACGAGGCCTCTCGCCCTCTCGCACCTCCGCTTCACGCGCCGCCTCGGCTCCGGCGACATGAGCGCCGTCTATTTGGCGGAGCCCAAAGAAGAAGGTGGCGGTGCCGTGTTCGCGGCGAAGGTGATGGAGAAGGAGGACTTGGCGAGGAGGAACAAGGAAGGCAGAGCGAGGACAGAGAGGGAAATTCTGGAAATGTTGGATCACCCTTTCTTGCCCACGCTGTACGCGTCCATCCACGCGCCCAAATGGCTCTGCTTCTTAACGCCCTTCTGCCCCGGCGGTGATTTGCACGTCCTCCGCCAGCGCTTCCCCAACAAACGCTTCCTCGAATCCGCCGTCAGGTTCTACGCTTCGGAAGTGTTGTTGGCGCTTGAATATCTCCACATGTTAGGGATAATCTACCGCGACCTCAAGCCCGAAAACGTGTTGATAAGATCAGACGGCCACATCATGCTCACCGACTTCGATCTCTCACTAAAATGCGACGATTCCACATCAACGGCTCAGATCATCTCCGACCAAAACCCCCTTCCCACGCGCAACGACTGCCACGTGGAAGGCGCACGCGTGGCGGCGTCGTCGTCGTGCATAATCCCGAACTGCATAGTCCCGACGGCGTCGTGTTTCCAGCCAAAACGCAAGCGAAAGAAGAAGCAGAAGCTGCGTAGTGGGCCTGCGTTCGTGGCGGAGCCCATGAACGTTCGGTCGATGTCGTTCGTGGGGACCCACGAGTACTTGGCGCCGGAGATCGTGTCCGGCGAGGGCCACGGCAGTGCGGTGGACTGGTGGACTTTGGGGATATTTATGTTCGAACTGTTTTACGGCGTGACACCGTTCAAGGGCATGGACCACGAGCTGACCCTGGCGAACATTGTGGCTCGAGCCCTTGAGTTCCCGAAGGAACCGGCGTGTTCTGGCGCCATGAAGGACCTTATATCAAAGTTGCTGGTTAAGGACCCCGCCAAGCGGCTAGGGTCCCTCATGGGTGCTTCTGCGATCAAGCAACACTCTTTTTTTGACGGCGTTAATTGGGCGTTGCTGAGGTGTACCACTCCACCCTTTCTTCCTCCACCTAATGCTAAAGCTGTATATGATGATGATCATCACACTTCCCCTGACATTTTCGTTGATTCTTATTAA 1338 0.5725 MDAEDLADDLHSLSFASTNTTKRSTSFSSETTTVTPSTSSHFLHAPLPNAKPHAPSSDPCASFIHRTRPLALSHLRFTRRLGSGDMSAVYLAEPKEEGGGAVFAAKVMEKEDLARRNKEGRARTEREILEMLDHPFLPTLYASIHAPKWLCFLTPFCPGGDLHVLRQRFPNKRFLESAVRFYASEVLLALEYLHMLGIIYRDLKPENVLIRSDGHIMLTDFDLSLKCDDSTSTAQIISDQNPLPTRNDCHVEGARVAASSSCIIPNCIVPTASCFQPKRKRKKKQKLRSGPAFVAEPMNVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGVTPFKGMDHELTLANIVARALEFPKEPACSGAMKDLISKLLVKDPAKRLGSLMGASAIKQHSFFDGVNWALLRCTTPPFLPPPNAKAVYDDDHHTSPDIFVDSY 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01782 445 MobiDBLite consensus disorder prediction 19 44 - -
Viun11g01782 445 PANTHER FLIPPASE KINASE 1-RELATED 22 427 - -
Viun11g01782 445 FunFam serine/threonine-protein kinase D6PK-like 300 423 - -
Viun11g01782 445 FunFam serine/threonine-protein kinase D6PKL2 74 160 - -
Viun11g01782 445 SUPERFAMILY Protein kinase-like (PK-like) 55 435 IPR011009 -
Viun11g01782 445 CDD STKc_phototropin_like 73 428 - -
Viun11g01782 445 Gene3D Transferase(Phosphotransferase) domain 1 301 423 - -
Viun11g01782 445 Gene3D Transferase(Phosphotransferase) domain 1 161 236 - -
Viun11g01782 445 ProSiteProfiles Protein kinase domain profile. 75 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01782 445 Gene3D Phosphorylase Kinase; domain 1 75 160 - -
Viun11g01782 445 Pfam Protein kinase domain 302 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01782 445 Pfam Protein kinase domain 78 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01782 445 SMART serkin_6 75 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01782 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Viun11g01782 445 ProSitePatterns Protein kinases ATP-binding region signature. 81 106 IPR017441 GO:0005524
Viun11g01782 445 FunFam serine/threonine-protein kinase D6PK-like 161 228 - -
Viun11g01782 445 MobiDBLite consensus disorder prediction 19 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01782 Viun-Chr11 33823307 33826491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01782 4 445 AGC Kinase Gene Family AT3G44610 62.939 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Viun11g01782 Pkinase 6.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01782 K08286 - gmx:100811470 703.745