Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01776 ATGGCGTCAGAAAACACAGTGACTTCAAACTCTACAGATGGTGATCGACCGAAGGTGGTTGTCATAATGGGACCCACAGCTTCCGGGAAGTCGAAGCTTGCCGTTGATTTAGCGTCTCACTACCCCATCGAAGTCATCAACGCTGATTCCATGCAGGTCTACCGCGGCCTCGATGTTCTCGCCAACAAACTCCCTCTCTCTCACCAAAACGGAGTGCCGCATCATCTCTTGGGCACTGTAAGCCCCAACGTGGAATTCACGGCTAAATCGTTTCGGGATTCCGCTATCCCCATTATTGATGACATATTGGCTCGCAGTCATTTGCCTGTTATAGTTGGGGGTACAAATTACTATATCCAGGCTCTTGTGAGTTCATTTCTTCTAGATGATTCGGCCGAAGATATGGATGAAAGCTGTTTGGGTGACCTACCTGGCATCACGCAGTCTGAGAACAGTTTCCCTGGTGAAAATGATGGTTCAAGCTATGGTTATGATCTGCTCAAGGATATTGATCCAGTTGCTGCTAATAGAATCCATCCAAATAACCATAGAAAGATAAATCAATATATTAATTTGTACACTCGCACTGGTGTTCTTCCTAGTAAAGTTTTTCAAGGAAAGGCAGCAGAGAATTGGGGTCAAGTTGACAACTTAAGATATGATTGTTGTTTTATATGTGTGGATGCATCTCTCCCTGTACTGGACAGATATGTAGAGCAGAGGGTAGATTGCATGATGGACGATGGATTACTCAATGAAGTGTATGACATTTATAATTTGAATGCAGATTATACTAGAGGTTTGCGGCAGGCCATTGGTGTCCGTGAATTTGAGCCTCTTCTTAGAACTTGTGTTGTCAAAGACATGTATGAAAGAGAGAGGGAATTGACTGAAGGATCCGAAAAGGGCAAGACATTGTTTAATTGTAATTTGATGGAGTTGGTGAGATCTTCCGATGATACTGAATCCACAATTCTTTTGGAAGAAGCAATTGAAAAAGTAAAGGTTAATACCAGGAGACTTGTTCGGCGACAGAAGAGGATGATCAGTCGACTGCAGACATTGTTTGGTTGGAAAATACACTATGTTGATTCCACAGAAGCAATATCAAGCAAATCAGAAAATGTATGGGCACGCCAAGTAGTTGAATCTGCTGTGAAGATAGTTAAATCTTTCTTGAGTGAGAACGGAAGCTTGTCATCCACCTTTGGGACTTCAGATGACACAGGGATGAAAATAATCCAAAGGGACCTCTGGACTCAATACGTTTGCAAGGCTTGTGGAGATCGCGTTCTTAGAGGATTACATGAATGGGAACAACACAGACAAGGTCGGGGGCACCGAAAACGTATTTCAAGTCTTAAGAGCAAGGGCCAATTTCCTGGTTTCGTGGAACAGAAGGTTGAGTATTCTCAGGTGAAGAATAACAATATGTCGTATGACTTGTGA 1449 0.43 MASENTVTSNSTDGDRPKVVVIMGPTASGKSKLAVDLASHYPIEVINADSMQVYRGLDVLANKLPLSHQNGVPHHLLGTVSPNVEFTAKSFRDSAIPIIDDILARSHLPVIVGGTNYYIQALVSSFLLDDSAEDMDESCLGDLPGITQSENSFPGENDGSSYGYDLLKDIDPVAANRIHPNNHRKINQYINLYTRTGVLPSKVFQGKAAENWGQVDNLRYDCCFICVDASLPVLDRYVEQRVDCMMDDGLLNEVYDIYNLNADYTRGLRQAIGVREFEPLLRTCVVKDMYERERELTEGSEKGKTLFNCNLMELVRSSDDTESTILLEEAIEKVKVNTRRLVRRQKRMISRLQTLFGWKIHYVDSTEAISSKSENVWARQVVESAVKIVKSFLSENGSLSSTFGTSDDTGMKIIQRDLWTQYVCKACGDRVLRGLHEWEQHRQGRGHRKRISSLKSKGQFPGFVEQKVEYSQVKNNNMSYDL 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01776 482 FunFam LD10347p 152 208 - -
Viun11g01776 482 Gene3D - 147 207 - -
Viun11g01776 482 Hamap tRNA dimethylallyltransferase [miaA]. 19 370 IPR018022 GO:0008033
Viun11g01776 482 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 17 393 IPR039657 -
Viun11g01776 482 Pfam IPP transferase 52 347 - -
Viun11g01776 482 FunFam tRNA dimethylallyltransferase 417 460 - -
Viun11g01776 482 Gene3D Classic Zinc Finger 417 463 - -
Viun11g01776 482 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 19 293 IPR018022 GO:0008033
Viun11g01776 482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 261 IPR027417 -
Viun11g01776 482 Gene3D - 17 415 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01776 Viun-Chr11 33741623 33746123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01776 22 469 C2H2 Transcription Factor Family AT2G27760 56.798 1.81e-177 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01776 K00791 - gmx:100792690 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01776 11 33741623 33746123 Viun11g01776 11 33741623 33746123 ECH