Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01754 ATGGGGTTTGCCAAAGTTTTAAGCTATTTCACCCTTCTCCTTTTCATAGGGTATACTTTGGTGAATGGATCCACCCCAAAGCATCATATAGTTTACATGGGAGATCATTCACACCCTAATTCAGAATCCGTGATCAGAGCAAACCATGAGATACTAGCTTCAGTCACTGGAAGCCTAAGTGAAGCAAAAGCAGCAACCATCCACCATTACAGTAAAAGCTTCCAAGGCTTCTCAGCTATGATTACACCTGAACAAGCCACTCAACTTGCAGAACATAAATCGGTAGTGTCAGTTTTTGAGAGCAAAATGAATAAACTCCACACCACACATTCTTGGGATTTTCTTGGATTGGATACTATCTACAGGAACCATCCTATACCACTGGACACTGCATCCGAAGTCATTGTTGGTGTCATTGACTCTGGAATCTGGCCGGAATCGGAAAGCTTCACTGATTATGGATTAGGTCCCGTGCCCAAAAGATTCAAAGGAGAGTGTGTGACTGGTGATAACTTTACACTAGCCAATTGCAACAGGAAAATTATAGGTGCTCGGTTCTATTCAAAAGGGTTTGAAGCAGAAAATGGCCCTCTAGATGGTGTTGTGAATAAGATATTTTTCCGGTCACCTCGAGATAATGATGGACATGGAACACACACAGCTTCCACAATAGCAGGGTCCATTGTTGCTAATGCCAGCTTATTTGGCATTGCCAAAGGAACAGCTAGAGGTGGTGCCCCAAGTGCTAGACTTTCCATCTACAAGGCCTGTTGGTTTGACTTTTGCAGTGATGCTGATATTCTTTCAGCAGTGGATGATGCTATTCATGATGGCGTTGACATATTATCTCTTTCTCTTGGTCCTAATCCTCCTCAGCCAATTTACTTTGAAGATGCAGTCAGTTTAGGAACATTCCATGCATTTCAAAAGGGTATTCTTGTTTCTGCTTCAGCTGGAAACTCAGTTTTTCCACGTACTGCATGCAATGTTGCTCCTTGGATCCTCACTGTTGCTGCTAGCTCCATAGACAGAGATTTCAGTTCAAACATCTACCTTGGCAACTCAAAGGTCTTAAAGGGTTCTTCTTTGAATCCAATAAAAATGGAGCACCAGTATGGTTTGGTATATGGAAGTGCTTCTGCAGCTGCTGGAGTTTCAGCAGTAAATGCAAGCTTCTGCAAGAACAATACTCTAAATCCTACCTTGATCAAGGGTAAAATTGTGATCTGTACAATCGAGAATTTCAGTGATAACAGACAAGAGAAGGCCATAGAAATAAGGAAAGGTGGAGGGGTTGGAATGATACTTATTGATCATAATGCCAAAGATGTTGGTTTTCAATTTGTCATCCCAAGCACTCTCATTGGTCAGGATGCTGTAGAAGAGCTTCAAGCATATATAAAGACTGATAAGAATCCTACTGCTAGAATCTACCCAACAATAACTGTAGTTGGTACCAAACCAGCACCACAAATGGCAGCTTTTTCTTCTATGGGGCCAAATATTATAACACCAGACATTATTAAGCCAGACATCACAGCACCTGGACTGAATATTTTGGCAGCATGGTCTCCAGTAGGAACTGATGCCACAGTTGAACAACGACCTGTCAACTACAACATCATTTCAGGAACATCAATGTCTTGTCCACACATAACTGCAGTTGCAGCAATTATTAAATCTCACCACCCATCTTGGGGTCCTGCAGCCATAATGTCTTCAATAATGACAACAGCAACAGTTACTGATAACACACACCATCTCATAAGACGAGAACCAAATGGAACTCAAACCACACCATTTGACTATGGATCCGGACATGTTAATCCAGTTGCATCACTGAATCCGGGATTAGTATATGAATTTAACTCCCAAGATGTTCTGAATTTTCTGTGCAGCAATGGAGCAAGCCCAGCACAACTTAAAAACCTCACTGGGGATCTTACTCAATGCCAAAAACCTCTTACAGCTTCCTACAACTTCAACTATCCTTCCATTGGAGTGTCCAACTTGAATGGAAGTTTATCAGTTTATCGTACAGTTACTTATTATGGTGGGGAGCCAACAGTATATTCTGCAAGTATTGAAAATCCATCTGGTGTGAAGGTTACTGTTACTCCAGCAGAATTGAAGTTCTACAAAACTGGGGAGAAGATAACTTTCAGGATTGATTTCTTCCCTTTCAAGAAAAGCAATGGAAACTTTGTGTTTGGCTCCTTGACATGGAATAATGGCAAACAAAGGGTTAGGAGTCCTATTGGTGTCAATGTACTCTCTACTTAA 2283 0.4139 MGFAKVLSYFTLLLFIGYTLVNGSTPKHHIVYMGDHSHPNSESVIRANHEILASVTGSLSEAKAATIHHYSKSFQGFSAMITPEQATQLAEHKSVVSVFESKMNKLHTTHSWDFLGLDTIYRNHPIPLDTASEVIVGVIDSGIWPESESFTDYGLGPVPKRFKGECVTGDNFTLANCNRKIIGARFYSKGFEAENGPLDGVVNKIFFRSPRDNDGHGTHTASTIAGSIVANASLFGIAKGTARGGAPSARLSIYKACWFDFCSDADILSAVDDAIHDGVDILSLSLGPNPPQPIYFEDAVSLGTFHAFQKGILVSASAGNSVFPRTACNVAPWILTVAASSIDRDFSSNIYLGNSKVLKGSSLNPIKMEHQYGLVYGSASAAAGVSAVNASFCKNNTLNPTLIKGKIVICTIENFSDNRQEKAIEIRKGGGVGMILIDHNAKDVGFQFVIPSTLIGQDAVEELQAYIKTDKNPTARIYPTITVVGTKPAPQMAAFSSMGPNIITPDIIKPDITAPGLNILAAWSPVGTDATVEQRPVNYNIISGTSMSCPHITAVAAIIKSHHPSWGPAAIMSSIMTTATVTDNTHHLIRREPNGTQTTPFDYGSGHVNPVASLNPGLVYEFNSQDVLNFLCSNGASPAQLKNLTGDLTQCQKPLTASYNFNYPSIGVSNLNGSLSVYRTVTYYGGEPTVYSASIENPSGVKVTVTPAELKFYKTGEKITFRIDFFPFKKSNGNFVFGSLTWNNGKQRVRSPIGVNVLST 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01754 760 ProSiteProfiles Serine proteases, subtilase domain profile. 111 614 - -
Viun11g01754 760 CDD PA_subtilisin_like 349 477 - -
Viun11g01754 760 FunFam Subtilisin-like protease SBT5.3 21 107 - -
Viun11g01754 760 FunFam Subtilisin-like protease SBT1.5 133 357 - -
Viun11g01754 760 Pfam PA domain 388 463 IPR003137 -
Viun11g01754 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Viun11g01754 760 Gene3D - 631 758 - -
Viun11g01754 760 Gene3D Peptidase S8/S53 domain 134 626 IPR036852 GO:0004252|GO:0006508
Viun11g01754 760 Pfam Subtilase family 132 586 IPR000209 GO:0006508|GO:0008236
Viun11g01754 760 CDD Peptidases_S8_3 105 580 IPR034197 -
Viun11g01754 760 Pfam Peptidase inhibitor I9 29 106 IPR010259 -
Viun11g01754 760 SUPERFAMILY Subtilisin-like 106 618 IPR036852 GO:0004252|GO:0006508
Viun11g01754 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 753 IPR045051 -
Viun11g01754 760 FunFam subtilisin-like protease SBT1.5 343 484 - -
Viun11g01754 760 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Viun11g01754 760 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Viun11g01754 760 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Viun11g01754 760 Gene3D - 343 484 - -
Viun11g01754 760 Pfam Fibronectin type-III domain 660 755 IPR041469 -
Viun11g01754 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 107 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01754 Viun-Chr11 33543642 33548093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01754 29 757 Subtilisin-like Serine Gene Family AT2G04160 43.717 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01754 - - gmx:100792672 1338.17