Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01735 ATGGCGGGCCAAAGAATAGGAGAAACGGGTCTGTCTGAATCAGGACCTTCAAGTCACCAGGTTCCTTATGGAGTTCTTCATGGGATTAATACCTCAGCATCAAGCCTAATGAATCAAGGGTCTGGTTTTGATTTTGGAGAGCTGGAAGAGGCTTTTGCTCTGCAAGGAATTAAGATAAGAAGTGATGAAGCCAAAGCATCTTTATTCACAGGAAGGCCTTCAGCCACACTGGAAATGTTCCCTTCATGGCCAATGAGATTCCATCAAACCCCAAGAGGAGGTTCAAAATCAGGAGGAGAAAGCACTGATTCAGGATCAGGAGTGAACACTCTTTCAAGCAAAACTGAGCTGCAATTTGAAACAGAATCTCCCATAAGCATAAAAGCATCTTCTTCTTCAGATCATCAACATGCTTTTGATCAGCTTCAACAACAACAACAGGAGACAGCAACTGATGCATCAAGGGCAGGGACATCACAGACTCAATCAGCAGCCAAATCACAACAAGAAAAGAGAAAAGGAGCTGGTTCCACATCAGAGAAGCCACTTGATGCAAAGACACTGAGACGTTTAGCTCAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAGTCAAGTAGATTAAAGCTCACACACCTTGAACAAGACCTTCAAAGAGCTCGCTCTCAGGGAGTGTTTATGGGTTGTGGTGGTGCTGGTGGAAGTATAAGTTCTGGAGCTGCAATGTTTGACATGGAGTATGCAAGATGGCTAGAAGATGACCACCGGCACATGGCGGAGCTCCGGACCGGGCTGCAGGCGCCGCTGTCCGACGGCGAACTAAGGGTGATTGTTGATGGATATCTGTCTCATTATGATGAGGTTTTCAGGCTGAAGGGAGTTGCTGCTAAAACCGATGTGTTTCATCTCATCAATGGCATGTGGACTTCACCAGCTGAAAGATGCTTCCTCTGGATTGGTGGTTTCAGACCATCAGAACTCATCACAATGTTGATACAACAGTTGGAACCCCTTGCTGAACAGCAAATTATGGGTATATGTGCTCTCCGCCAATCTTCAGTGCAAGCAGAAGAGGCTCTCACTCAAGGCCTTGAACAGCTTCAACAGTCTCTCGTTGACACCATCGCCGGTGGCTCCGTCGCCGACGGCGTTCAACAGATGGTCGCCGCCATGAACAAGCTCGCCAACCTTGAAGGATTTGTTGGCCAGGCTGATAATTTGAGACAACAAACCCTTCACCAGTTATGTCGATTACTCACAGTTCGACAAGCTGCAAGATGTTTTGTTGTGATCGGAGAGTACTATGGTCGTTTAAGAGCCCTAAGTTCTCTTTGGGCATCAAGACCTAGAGAGAGCATGATGAGTGATGATAACTCATGTCAAACAACCACAGAACTGCAGATGGTTCAACCTTCTCAGAATCATTTCTCCAATTTCTGA 1467 0.4635 MAGQRIGETGLSESGPSSHQVPYGVLHGINTSASSLMNQGSGFDFGELEEAFALQGIKIRSDEAKASLFTGRPSATLEMFPSWPMRFHQTPRGGSKSGGESTDSGSGVNTLSSKTELQFETESPISIKASSSSDHQHAFDQLQQQQQETATDASRAGTSQTQSAAKSQQEKRKGAGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTHLEQDLQRARSQGVFMGCGGAGGSISSGAAMFDMEYARWLEDDHRHMAELRTGLQAPLSDGELRVIVDGYLSHYDEVFRLKGVAAKTDVFHLINGMWTSPAERCFLWIGGFRPSELITMLIQQLEPLAEQQIMGICALRQSSVQAEEALTQGLEQLQQSLVDTIAGGSVADGVQQMVAAMNKLANLEGFVGQADNLRQQTLHQLCRLLTVRQAARCFVVIGEYYGRLRALSSLWASRPRESMMSDDNSCQTTTELQMVQPSQNHFSNF 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01735 488 Pfam Seed dormancy control 266 341 IPR025422 GO:0006351|GO:0043565
Viun11g01735 488 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 189 204 IPR004827 GO:0003700|GO:0006355
Viun11g01735 488 SMART brlzneu 182 258 IPR004827 GO:0003700|GO:0006355
Viun11g01735 488 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 184 228 IPR004827 GO:0003700|GO:0006355
Viun11g01735 488 ProSiteProfiles DOG1 domain profile. 249 457 IPR025422 GO:0006351|GO:0043565
Viun11g01735 488 PANTHER TRANSCRIPTION FACTOR TGA9 124 460 - -
Viun11g01735 488 MobiDBLite consensus disorder prediction 94 172 - -
Viun11g01735 488 MobiDBLite consensus disorder prediction 81 188 - -
Viun11g01735 488 Gene3D - 185 233 - -
Viun11g01735 488 Coils Coil 212 232 - -
Viun11g01735 488 Pfam bZIP transcription factor 185 227 IPR004827 GO:0003700|GO:0006355
Viun11g01735 488 FunFam BZIP family transcription factor 185 234 - -
Viun11g01735 488 MobiDBLite consensus disorder prediction 173 188 - -
Viun11g01735 488 SUPERFAMILY Leucine zipper domain 186 228 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01735 Viun-Chr11 33430741 33437693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01735 142 488 bZIP Transcription Factor Family AT1G08320 70.085 0.0 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun11g01735 DOG1 7.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01735 K14431 - gmx:100101904 797.349