Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01734 ATGGCGGGCCAAAGAATAGGAGAAACGGGTCTGTCTGAATCAGGACCTTCAAGTCACCAGGTTCCTTATGGAGTTCTTCATGGGATTAATACCTCAGCATCAAGCCTAATGAATCAAGGGTCTGGTTTTGATTTTGGAGAGCTGGAAGAGGCTTTTGCTCTGCAAGGAATTAAGATAAGAAGTGATGAAGCCAAAGCATCAGCTTTATTCACAGGAAGGCCTTCAGCCACACTGGAAATGTTCCCTTCATGGCCAATGAGATTCCATCAAACCCCAAGAGGAGGTTCAAAATCAGGAGGAGAAAGCACTGATTCAGGATCAGGAGTGAACACTCTTTCAAGCAAAACTGAGCTGCAATTTGAAACAGAATCTCCCATAAGCATAAAAGCATCTTCTTCTTCAGATCATCAACATGCTTTTGATCAGCTTCAACAACAACAACAGGAGACAGCAACTGATGCATCAAGGGCAGGGACATCACAGACTCAATCAGCAGCCAAATCACAACAAGAAAAGAGAAAAGGAGCTGGTTCCACATCAGAGAAGCCACTTGATGCAAAGACACTGAGACGTTTAGCTCAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAGTCAAGTAGATTAAAGCTCACACACCTTGAACAAGACCTTCAAAGAGCTCGCTCTCAGGGAGTGTTTATGGGTTGTGGTGGTGCTGGTGGAAGTATAAGTTCTGGAGCTGCAATGTTTGACATGGAGTATGCAAGATGGCTAGAAGATGACCACCGGCACATGGCGGAGCTCCGGACCGGGCTGCAGGCGCCGCTGTCCGACGGCGAACTAAGGGTGATTGTTGATGGATATCTGTCTCATTATGATGAGGTTTTCAGGCTGAAGGGAGTTGCTGCTAAAACCGATGTGTTTCATCTCATCAATGGCATGTGGACTTCACCAGCTGAAAGATGCTTCCTCTGGATTGGTGGTTTCAGACCATCAGAACTCATCACAATGTTGATACAACAGTTGGAACCCCTTGCTGAACAGCAAATTATGGGTATATGTGCTCTCCGCCAATCTTCAGTGCAAGCAGAAGAGGCTCTCACTCAAGGCCTTGAACAGCTTCAACAGTCTCTCGTTGACACCATCGCCGGTGGCTCCGTCGCCGACGGCGTTCAACAGATGGTCGCCGCCATGAACAAGCTCGCCAACCTTGAAGGATTTGTTGGCCAGGCTGATAATTTGAGACAACAAACCCTTCACCAGTTATGTCGATTACTCACAGTTCGACAAGCTGCAAGATGTTTTGTTGTGATCGGAGAGTACTATGGTCGTTTAAGAGCCCTAAGTTCTCTTTGGGCATCAAGACCTAGAGAGAGCATGATGAGTGATGATAACTCATGTCAAACAACCACAGAACTGCAGATGGTTCAACCTTCTCAGAATCATTTCTCCAATTTCTGA 1470 0.4639 MAGQRIGETGLSESGPSSHQVPYGVLHGINTSASSLMNQGSGFDFGELEEAFALQGIKIRSDEAKASALFTGRPSATLEMFPSWPMRFHQTPRGGSKSGGESTDSGSGVNTLSSKTELQFETESPISIKASSSSDHQHAFDQLQQQQQETATDASRAGTSQTQSAAKSQQEKRKGAGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTHLEQDLQRARSQGVFMGCGGAGGSISSGAAMFDMEYARWLEDDHRHMAELRTGLQAPLSDGELRVIVDGYLSHYDEVFRLKGVAAKTDVFHLINGMWTSPAERCFLWIGGFRPSELITMLIQQLEPLAEQQIMGICALRQSSVQAEEALTQGLEQLQQSLVDTIAGGSVADGVQQMVAAMNKLANLEGFVGQADNLRQQTLHQLCRLLTVRQAARCFVVIGEYYGRLRALSSLWASRPRESMMSDDNSCQTTTELQMVQPSQNHFSNF 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01734 489 PANTHER TRANSCRIPTION FACTOR TGA9 125 461 - -
Viun11g01734 489 FunFam BZIP family transcription factor 186 235 - -
Viun11g01734 489 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 190 205 IPR004827 GO:0003700|GO:0006355
Viun11g01734 489 SMART brlzneu 183 259 IPR004827 GO:0003700|GO:0006355
Viun11g01734 489 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 185 229 IPR004827 GO:0003700|GO:0006355
Viun11g01734 489 Gene3D - 186 234 - -
Viun11g01734 489 MobiDBLite consensus disorder prediction 95 173 - -
Viun11g01734 489 MobiDBLite consensus disorder prediction 174 189 - -
Viun11g01734 489 MobiDBLite consensus disorder prediction 82 189 - -
Viun11g01734 489 ProSiteProfiles DOG1 domain profile. 250 458 IPR025422 GO:0006351|GO:0043565
Viun11g01734 489 SUPERFAMILY Leucine zipper domain 187 229 IPR046347 GO:0003700|GO:0006355
Viun11g01734 489 Pfam bZIP transcription factor 186 228 IPR004827 GO:0003700|GO:0006355
Viun11g01734 489 Pfam Seed dormancy control 267 342 IPR025422 GO:0006351|GO:0043565
Viun11g01734 489 Coils Coil 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01734 Viun-Chr11 33430741 33437693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01734 143 489 bZIP Transcription Factor Family AT1G08320 70.085 0.0 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun11g01734 DOG1 7.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01734 K14431 - gmx:778195 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03216 5 42952145 42959282 Viun11g01734 11 33430741 33437693 PCT