Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01723 ATGGCTGAGGCGGATGAGCTGCCCCGGTCTATCGTGCGCCGTGTTGTGAAGGATAAACTGTCCCGATGCTCTGAAGAAGGAGAAATTTCCGTCAGCAAAGATGGTCTTCTCGCATTCTCAGAAAGCGGTAGGATCTTCATCCACTACCTTTCCGCCACGGCTAATGACATATGTAAGGAGTCAAAGAGACAAATTGTCAATGCTGAAGATGTTTTCAAAGCTCTTGAAGAAACCGAGTTCTCTGAGTTTATTCGTCCTCTAAAAGCTTCCCTTGAAGAGTTTAGGAAGAAGAATGTTGGAAAGAAAGCGGCTGTGGGAAAGGGAAAAGAAGAAGAGCAGAGAAAGAAAAGGAAATTGGAAGCTGAGTCATCTGACAAAGGTGAGGCTTCCATTAACGACGAGTCATCTGATAAAGCGGAGGGTTCTGATAAAGGTGAGGGCGAAGACGATGAATAA 456 0.4539 MAEADELPRSIVRRVVKDKLSRCSEEGEISVSKDGLLAFSESGRIFIHYLSATANDICKESKRQIVNAEDVFKALEETEFSEFIRPLKASLEEFRKKNVGKKAAVGKGKEEEQRKKRKLEAESSDKGEASINDESSDKAEGSDKGEGEDDE 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01723 151 Coils Coil 109 129 - -
Viun11g01723 151 Gene3D Histone, subunit A 2 150 IPR009072 GO:0046982
Viun11g01723 151 SUPERFAMILY Histone-fold 7 123 IPR009072 GO:0046982
Viun11g01723 151 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 6 75 IPR003958 -
Viun11g01723 151 MobiDBLite consensus disorder prediction 100 143 - -
Viun11g01723 151 FunFam DNA polymerase epsilon subunit 3 1 140 - -
Viun11g01723 151 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 4 144 - -
Viun11g01723 151 Coils Coil 58 78 - -
Viun11g01723 151 MobiDBLite consensus disorder prediction 100 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01723 Viun-Chr11 33362749 33364737 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01723 7 107 CCAAT-HAP3 Transcription Factor Family AT5G47640 28.713 1.58e-09 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Viun11g01723 CBFD_NFYB_HMF 7.3e-07 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01723 K02326 - gmx:100306382 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01723 11 33362749 33364737 Viun11g01723 11 33362749 33364737 ECH