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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Viun11g01708
ATGGAAGACCATCATCCACCTGGGTTTCGCTTCTTCCCAACAGAAGAAGAGCTTGTTGGCTTCTACCTACGAAATAAGCTCGATGGTTCAATAAATGCTGCCGCCGCCGCCATTGATAGAGTTATACCAGTTGTTGATATCAATTCCCTGGAACCATGGAACCTCCCAACACTTGCTGGGGAGCTATGTCGTGGGGATACAGAGCAATGGTTTTTCTTTTCACCTGGGCAAGAGAGAGAAGCGAGAGGAGGGAGACCAAGCAGAACCACATCGTGTGGGTACTGGAAAGCCACTGGTTCACCTGGCTATGTTTATTCTTCTGATAACAGAGTCATTGGGGTGAAGAAATCCATGGTGTTCTACAAAGGAAAAGCTCCTATGGGAAGAAAAACCAAATGGAAGATGAATGAGTACAGAGCCATCTCAGTCCCTCACCAATCCAACCCTGTCACCCCTCAGTTGAGATGCGAATTCAGCTTATATCGGGTGTACATCGTATCTGGAAGCTTTCGAGCATTTGATCGACGTCCATCGGAGAGTGGAGGAACAGAGTCACGTGTTCATCAGAGTTCTTCATCTCAGGTTTCTCACTTGCTGGAACTTTCTCAGCTTTCTCAGCTCCCAGAAGGTGGAGGAGATTCAAGTAGCACGAACTGGAACGAGGAACAGCTTCAAGAACCGTCGTGGGAATTGGATTGGGAACACTTCAATTGGGTCTGA
720
0.4764
MEDHHPPGFRFFPTEEELVGFYLRNKLDGSINAAAAAIDRVIPVVDINSLEPWNLPTLAGELCRGDTEQWFFFSPGQEREARGGRPSRTTSCGYWKATGSPGYVYSSDNRVIGVKKSMVFYKGKAPMGRKTKWKMNEYRAISVPHQSNPVTPQLRCEFSLYRVYIVSGSFRAFDRRPSESGGTESRVHQSSSSQVSHLLELSQLSQLPEGGGDSSSTNWNEEQLQEPSWELDWEHFNWV
239
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Viun11g01708
239
Pfam
No apical meristem (NAM) protein
6
139
IPR003441
GO:0003677|GO:0006355
Viun11g01708
239
PANTHER
PROTEIN CUP-SHAPED COTYLEDON 2-RELATED
2
186
-
-
Viun11g01708
239
MobiDBLite
consensus disorder prediction
206
225
-
-
Viun11g01708
239
ProSiteProfiles
NAC domain profile.
5
166
IPR003441
GO:0003677|GO:0006355
Viun11g01708
239
MobiDBLite
consensus disorder prediction
206
226
-
-
Viun11g01708
239
MobiDBLite
consensus disorder prediction
175
194
-
-
Viun11g01708
239
Gene3D
NAC domain
14
168
IPR036093
GO:0003677|GO:0006355
Viun11g01708
239
SUPERFAMILY
NAC domain
4
164
IPR036093
GO:0003677|GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Viun11g01708
Viun-Chr11
33272503
33273871
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Viun11g01708
1
238
NAC Transcription Factor Family
AT5G22380
54.357
2.37e-82
244
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
NAC
Viun11g01708
NAM
2.7e-30
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Viun11g01708
-
-
gmx:100808618
357.451
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