Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun11g01678 | ATGTCTTCCACAAAGAAAAGCCTTCTCAGAACCGTGTTCACAGCAAACGGAAGCTGTGGTTGTAGCAAATCAAAAGCCTCTGAAGTGCATGAACCGACTCCCAAACCCAAAATCTCTCGTAACACTCATCAAAAGCCAAACAACCTTAGCAGTAAGGCCTCTTCCACCACTTCAATGGAACACGTAGATGAAGAAGAGTTCACCTCGACCACAGTATCCGAATCCGAGACTCTTCATGATCCCAACAACATCAACAACAACGACAACGTTGGACTCAAACGAAGCCCTCTTGTGGACAGTGTGGCCATCGAGAAGGACTCTTCCAACCCGTATCATGATTTCCGACACTCCATGCTCCAAATGATCTTTGAGAAAGAGATCGAGTCCGAGGACGATCTTCAAGATCTTCTGCAGTGCTTTCTTCACCTGAATGCACCATGTCACCACCACGTCATCGTCAAAGCCTTCAACGCCATCTGCGAAGAAGCTTTTCCTCGCAACGTTCGCACCACTCCGGCTGCGTCTGAACCTTCTCCCTCTCGCCGGAGCCCTCGCCGGAGCCCCCTTCAAAAGAGCAAGTGA | 582 | 0.4966 | MSSTKKSLLRTVFTANGSCGCSKSKASEVHEPTPKPKISRNTHQKPNNLSSKASSTTSMEHVDEEEFTSTTVSESETLHDPNNINNNDNVGLKRSPLVDSVAIEKDSSNPYHDFRHSMLQMIFEKEIESEDDLQDLLQCFLHLNAPCHHHVIVKAFNAICEEAFPRNVRTTPAASEPSPSRRSPRRSPLQKSK | 193 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun11g01678 | 193 | MobiDBLite | consensus disorder prediction | 169 | 193 | - | - | |
Viun11g01678 | 193 | MobiDBLite | consensus disorder prediction | 16 | 93 | - | - | |
Viun11g01678 | 193 | Pfam | Transcriptional repressor, ovate | 107 | 162 | IPR006458 | - | |
Viun11g01678 | 193 | ProSiteProfiles | OVATE domain profile. | 103 | 162 | IPR006458 | - | |
Viun11g01678 | 193 | MobiDBLite | consensus disorder prediction | 39 | 57 | - | - | |
Viun11g01678 | 193 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 27 | 163 | IPR038933 | GO:0045892 | |
Viun11g01678 | 193 | MobiDBLite | consensus disorder prediction | 171 | 185 | - | - | |
Viun11g01678 | 193 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 101 | 160 | IPR006458 | - | |
Viun11g01678 | 193 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 21 | - | - | |
Viun11g01678 | 193 | MobiDBLite | consensus disorder prediction | 71 | 93 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun11g01678 | Viun-Chr11 | 33046400 | 33047737 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | OFP | Viun11g01678 | Ovate | 2.6e-22 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun11g01678 | - | - | gmx:102660065 | 258.84 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun5g03179 | 5 | 42707770 | 42708255 | Viun11g01678 | 11 | 33046400 | 33047737 | PCT |