Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01678 ATGTCTTCCACAAAGAAAAGCCTTCTCAGAACCGTGTTCACAGCAAACGGAAGCTGTGGTTGTAGCAAATCAAAAGCCTCTGAAGTGCATGAACCGACTCCCAAACCCAAAATCTCTCGTAACACTCATCAAAAGCCAAACAACCTTAGCAGTAAGGCCTCTTCCACCACTTCAATGGAACACGTAGATGAAGAAGAGTTCACCTCGACCACAGTATCCGAATCCGAGACTCTTCATGATCCCAACAACATCAACAACAACGACAACGTTGGACTCAAACGAAGCCCTCTTGTGGACAGTGTGGCCATCGAGAAGGACTCTTCCAACCCGTATCATGATTTCCGACACTCCATGCTCCAAATGATCTTTGAGAAAGAGATCGAGTCCGAGGACGATCTTCAAGATCTTCTGCAGTGCTTTCTTCACCTGAATGCACCATGTCACCACCACGTCATCGTCAAAGCCTTCAACGCCATCTGCGAAGAAGCTTTTCCTCGCAACGTTCGCACCACTCCGGCTGCGTCTGAACCTTCTCCCTCTCGCCGGAGCCCTCGCCGGAGCCCCCTTCAAAAGAGCAAGTGA 582 0.4966 MSSTKKSLLRTVFTANGSCGCSKSKASEVHEPTPKPKISRNTHQKPNNLSSKASSTTSMEHVDEEEFTSTTVSESETLHDPNNINNNDNVGLKRSPLVDSVAIEKDSSNPYHDFRHSMLQMIFEKEIESEDDLQDLLQCFLHLNAPCHHHVIVKAFNAICEEAFPRNVRTTPAASEPSPSRRSPRRSPLQKSK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01678 193 MobiDBLite consensus disorder prediction 169 193 - -
Viun11g01678 193 MobiDBLite consensus disorder prediction 16 93 - -
Viun11g01678 193 Pfam Transcriptional repressor, ovate 107 162 IPR006458 -
Viun11g01678 193 ProSiteProfiles OVATE domain profile. 103 162 IPR006458 -
Viun11g01678 193 MobiDBLite consensus disorder prediction 39 57 - -
Viun11g01678 193 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 27 163 IPR038933 GO:0045892
Viun11g01678 193 MobiDBLite consensus disorder prediction 171 185 - -
Viun11g01678 193 NCBIfam uncharacterized plant-specific domain TIGR01568 101 160 IPR006458 -
Viun11g01678 193 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Viun11g01678 193 MobiDBLite consensus disorder prediction 71 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01678 Viun-Chr11 33046400 33047737 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Viun11g01678 Ovate 2.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01678 - - gmx:102660065 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03179 5 42707770 42708255 Viun11g01678 11 33046400 33047737 PCT