Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01667 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGGCGAGGAGCATTTGGAGCTGCTATTCTTGTTCACCACAAGGCTGAGAAGAAGAAATATGTGTTGAAAAAAATCAGGCTAGCAAGACAGACTGAACGATGCAGAAGATCTGCTCATCAAGAAATGGCTCTTATTGCTCGAATCCAGCATCCTTATATTGTGGAATTCAAGGAGGCATGGGTTGAGAAGGGTTGCTATGTCTGCATTGTCACTGGATATTGTGAAGGTGGAGACATGGCTGAATCGATGAAAAAATTAAATGGTGCTTACTTTCCTGAGGAGAAACTCTGCAAATGGTTCACTCAATTACTGTTGGCCGTGGAATACCTGCATTCAAATTTTGTTTTGCATCGTGACCTGAAGTGTTCCAACATCTTTCTTACCAAGGATCAGGATGTTCGCCTAGGGGATTTTGGCCTTGCTAAGACACTAAAAGCGGATGATTTGGCTTCCTCGGTGGTAGGAACTCCTAATTACATGTGTCCTGAACTGCTTGCAGATATACCGTATGGATTCAAATCTGATATTTGGTCACTAGGGTGTTGTATATACGAGATGGCTGCTCATCGCCCTGCTTTCAAAGCTTTTGATATGGCAGGGTTGATAAGCAAGATAAACCGTTCTTCCATTGGCCCTTTGCCTCCATGTTATTCCCCTTCCTTGAAAACACTAATAAAGGGCATGCTAAGAAAAAATCCTGAACATCGACCAACAGCATCTGAGGTGTTAAAGCACCCTTATTTACAGCCTTATGTGGATCAATACCGTCCAGCTTTCAGTCCTCCTTCAATTTCTACTGTCAACTATCCTCGGAAAAATATGGCTGAAAGTCAAAACAGTAATAGTTCCAACAGTGACAAAGATAGTTTGATGTCAACTGAGAAAAACATTGCAACAGCAGTACCAAAATGTGATAACAAAGCCACTGAGATGGATCAAACATCAATCGATGATGATGGTTCAGAGGAAGAAAGTGGCTCTAGTAATGCCAATGGGAATACCAAAACAACTGAGCAAGAGGTGATGAAACCATCTCATAATGCACAACATTCTCACGTTGAATCTAAGCAGCCAAAAACAATTAGAAATATCATGATGGCATTGAAAGAAGGAAAGGTTAGAGAAGCAACTTCTCCAATGAGAGGCAATCGTGTTAAGCCTGGTGGTGTGTCAGCACAGAAAATAAGTACTGAGACATTGTCTAAATTGCCTAAGCCTATTTTTATTGCTCCAATTGTGAAACCTATGCTAGAGTCACCAACTGTTGCACTTGCACGAGCAACCCCTGACTCTGCAAAAAGAATGCAGGGGTCACATCAATCAAAGCAACAGTTTCTGATGGTAGAAGCCTCACCAAAAGTTAAAGCTAGACATGATTTGACTCCACCACCTGCAGTTGTTAAACAAGTAGATGGAGATGTAGTTCCTCCCAGGCCTAGACAAAGGACTCCCCCAAGCTTACTTAGAAGACCTTCATTTTCTGGAAGAATGAGGTTGGCTGGAATTGATGTTCCAAATGCAGCAAATGATACTGGAAAACTAGGCACAGATAAAATAGTTCAGGAACATGAGACGAGCCCTTCTCAATTGGCCAACGACAATGTCCCAAGTATTTCGAGACAGGTTACTAGAGAGCCCCAGAAGATTTTTGAAAGAAGTTCCAGAGGAATGCAAACAGATAGCAGCAATTCTGCTTCGTCTTCAGTTTCTATCCGAGGTGAACTTGCTGATGATGCTACAACTTTTATTGACATGAGAGAACAGATGCTTCCTGGACATGTGAATGTAAGCCACATTGTAGGTGTGGAATCATGTCCTGACAGCAGCCCAGTGACTACTTGTGCACATTGTAAGATGGCTGAAAATGTTCCTAAAGATTCCTGTGAGATTGCCATGAATTTCCACAATACTATAAGCAGTAATGAGAAAGTGAATTCCAGTTTAAGTCAAGATCACCATGTTGAAGATTCTGAGGTAGCACTTGCTTCAGAAGGGGCTCTTCCTAAATCCCAGACAACTATGTCCACTACTTCTGGCTGTGATGATGGATATGTTGATCCCTCTGCTGGAGCCACCAAAGAAATCAAAGATTTTCAAGATGTTACCAAGGAAATGTCTTTGAACAAGTCTACCAAACACGAACCCCCAAGTTCTGGAGAAAAGTCTGTTCATACAGAAGTTAGTCCAGAAACTGAACCTGATCTACTGATTCAGCCAGCACTTGAATGTAAGTCCCCTGGTGATGACAAATTCACAGTGAGGGAGAGACTGTCACCTGTGGTTGAAACTGTTCCTCTGGTTACCCCTACTAAATTATCAAGCCAGAAAGTTTTGCAAGAGAAAGGAACTGTGCTGCAAAATCCAGCACCAGAAAGGCCTGATACTGGCCATCTTCCTCCAGCCTTTGATGATGTTATCCATGTCATACGCCATAGTAGTTACCGCGTTGGCAGTGATCAGCCAGTAAAGGAATCTGTGGAGATGGGAGTTCAGAATGTAGATGTTGGTAAGTTTATCAATGTTGTGAGAGATGATTTAGAAATGAGGAACATAACGTCACCTTTGACACTAAAATCTTCAAGCTGCTCTGATGTTACAAGCTTGAAATCTGACCAGTTGGAAATGAAAAACTTAAGCACTCCTCCCATCCTTAAATCTCCAAGTTTCTCAGATTCTTCCAGCAATTCTGATCATCCTGGTCTTAAGGAACAAGAAGTGAGTAACCCTCCTCCTCTAGTTTCAGAACCTGAATCTACTGAGCCCAGTAAAAGTAACACTCCTACGAATGAAGAGAAACCAGCAGCAAAGGAAACATTGGATGTGAAATCTTTCAGACAGAGAGCAGAGGCACTTGAAGAGCTCTTGGAGCTGTCTGCAGAGTTGCTGCAGCAAAACAGATTGGAGGAACTTCAAGTTGTTCTGAAGCCCTTTGGGAAAGATAAGGTTTCTCCAAGGGAGACAGCGATTTGGTTAGCCAAGAGTCTCAAAGGAATGATGTCTGAGGAAAGTGGGGGACGCTCTTCATAA 3069 0.4252 MESRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAESMKKLNGAYFPEEKLCKWFTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRPTASEVLKHPYLQPYVDQYRPAFSPPSISTVNYPRKNMAESQNSNSSNSDKDSLMSTEKNIATAVPKCDNKATEMDQTSIDDDGSEEESGSSNANGNTKTTEQEVMKPSHNAQHSHVESKQPKTIRNIMMALKEGKVREATSPMRGNRVKPGGVSAQKISTETLSKLPKPIFIAPIVKPMLESPTVALARATPDSAKRMQGSHQSKQQFLMVEASPKVKARHDLTPPPAVVKQVDGDVVPPRPRQRTPPSLLRRPSFSGRMRLAGIDVPNAANDTGKLGTDKIVQEHETSPSQLANDNVPSISRQVTREPQKIFERSSRGMQTDSSNSASSSVSIRGELADDATTFIDMREQMLPGHVNVSHIVGVESCPDSSPVTTCAHCKMAENVPKDSCEIAMNFHNTISSNEKVNSSLSQDHHVEDSEVALASEGALPKSQTTMSTTSGCDDGYVDPSAGATKEIKDFQDVTKEMSLNKSTKHEPPSSGEKSVHTEVSPETEPDLLIQPALECKSPGDDKFTVRERLSPVVETVPLVTPTKLSSQKVLQEKGTVLQNPAPERPDTGHLPPAFDDVIHVIRHSSYRVGSDQPVKESVEMGVQNVDVGKFINVVRDDLEMRNITSPLTLKSSSCSDVTSLKSDQLEMKNLSTPPILKSPSFSDSSSNSDHPGLKEQEVSNPPPLVSEPESTEPSKSNTPTNEEKPAAKETLDVKSFRQRAEALEELLELSAELLQQNRLEELQVVLKPFGKDKVSPRETAIWLAKSLKGMMSEESGGRSS 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01667 1022 FunFam Serine/threonine-protein kinase Nek5 90 328 - -
Viun11g01667 1022 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Viun11g01667 1022 MobiDBLite consensus disorder prediction 313 371 - -
Viun11g01667 1022 MobiDBLite consensus disorder prediction 892 916 - -
Viun11g01667 1022 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 580 - -
Viun11g01667 1022 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Viun11g01667 1022 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01667 1022 MobiDBLite consensus disorder prediction 720 750 - -
Viun11g01667 1022 SUPERFAMILY Protein kinase-like (PK-like) 4 300 IPR011009 -
Viun11g01667 1022 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01667 1022 FunFam Serine/threonine-protein kinase Nek2 5 87 - -
Viun11g01667 1022 MobiDBLite consensus disorder prediction 339 358 - -
Viun11g01667 1022 CDD STKc_Nek 7 262 - -
Viun11g01667 1022 MobiDBLite consensus disorder prediction 566 585 - -
Viun11g01667 1022 MobiDBLite consensus disorder prediction 720 742 - -
Viun11g01667 1022 MobiDBLite consensus disorder prediction 892 955 - -
Viun11g01667 1022 MobiDBLite consensus disorder prediction 555 585 - -
Viun11g01667 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Viun11g01667 1022 MobiDBLite consensus disorder prediction 925 946 - -
Viun11g01667 1022 Gene3D Transferase(Phosphotransferase) domain 1 90 378 - -
Viun11g01667 1022 Coils Coil 948 985 - -
Viun11g01667 1022 MobiDBLite consensus disorder prediction 472 505 - -
Viun11g01667 1022 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01667 Viun-Chr11 32978169 32985336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01667 14 263 MAP Kinase Kinase Kinase AT1G53570 31.373 7.14e-36 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Viun11g01667 Pkinase 2.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01667 K08857 - gmx:100818747 1599.72