Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01662 ATGGGGTTTTTGCTCAAAGAGGTTTTGAAGACTCTGTGCTCAAGGAATCGCTGGTCTTATGCCGTGTTTTGGAAGATCGGTTGCAACAATTCCAAGCTGTTAATCTGGGAAGATCATTACTATGAACCCTTGCCATCTCCTTTCCCTCCACGCCATGTTGGGATGTCTAATTTTCCATACCGTGACGGGGAAGGGTGCTGGTTTTCTTCTGAGTCTCAACTGGGGATTCAGGAGGAGGACAGAGTCGGTGGATTGATTAACAAAATGATGCTGAATAATTCAGTCAGTATTGCTGGAGAAGGGATGGTTGGACGGGCAACATTTACAGGAAACTATCAGTGGATTCTTATGAACAATTTCAGTAGAGATGCATATCCACCACAGGTGTATACTGAGTTGCATTACCAATTTTCTGCTGGAATGCAGACAGTAGCAGTTATTCCTGTGCTTCCTCATGGGGTTGTTCAATTTGGTTCTTTATTGCCAATAATGGAAGATATTGGATTTGTGAATGATGTGAAGAACTTGATCTTGCAATTGGGATGTGTACCTGGTGCCCTTCTTTCTGAAGACTATTCAGCAAAAGTTTCTAGTGAAAGACTTGGTGTACCTGTCACTATTGATCCACCTGTCGTTACGTCTAAATGCACTCCCTCTGCAGCTAATGGCTCCAACCAACTAACTGATTCTACTATTGCTTCAAGGTCTATTGCTCCATCACCTCATCCGCCAAGGCAAGAAATAGATAATTACCAGGCTTCTGTATTGACACCTCAAACCTATGACCAAAACCAAATATTTGATAGCATTTGCCAACCAAAATCTCATTCAATGATCAAAACAATTGCCTATGGCCAGCAGAAGAAGACAGTGGTCCATGCTGAAGCTAAAGTGATACCTACAAATTTTGATTCATGTATGCAACAACCTTCTGCTTATAATTCCAGATCTGCATTCAATGAATTAGCTGGCTTCAATCAATCAAATCTGAGTTGCAACCTTAACTATATGGAACAACAAACATCAGGTGTTGGAAGACAGAGTCACGTTAATCCCAACATGAATCCATCAAGTGCCTCAAATATGCCTCAACTGAAAACAGGTGCAGGCAAAATTCTTGAACAGAATCAGAGTTCTGGTGGCAGTTCACTATTTGGAGGAATCCCAATGTGTGGTGGGAGTAATCTTTTGAGGACAAATATGATTAACTGCTCTGTTTCGAATTCTCCCAAAGTACCACCCACTTCTGAATTTTCTGGAAGTCACAAGCTTGAGTTTGGGCTTCAAAATAACAATTCAACAACTGATGCTGGACTCTGTTCTGTGCCTACTTTCTGTAATCAATCAGTTACCAGTCACGTGAATCTTGAAAACTCTGCTCAGAAGAACCTTCCCATTGATTTAAAGCATGCTTTCGTTTCAACTGAACAAAGGATACCCGATGATTTGCTTCATACCGCCCTTAATATTCCGTCTCTTCATCTTGAGGAGAATGAGCCTATGAGAGATCATATTCCTGGTTTTGTTCAAGATTGCCTCAATAAAGATGTTACTGGTATGGTGAAAATGAATGTTAAGCATGAAGACACCTATACTCAACTTCCATCGGGGGATGATCTCTTCGATGTTTTAGGTGTGGATTTGAAAAGGCAACTACTCAATGGAAACTGGGATAATTTACTTGCCACTGATTCAGAGGCCAACAGAGAAAATCTAGATAAAAAGGCAACATGCATGAATTTGCAAGGTGTACGTCCTGATAACAGCTATTCAGTTAAAGAAGCAATATCAGACAGTGGCATCTTCTCTGGAACCGGCACCGACCACCTCTTAGATGCTGTTGTTTCAAAAGCTCAATCTGCTCCAAAACAAAGTTCTGATGAAATTTCTTGCAGGACAACATTGACAAGGGTTAGTACTGCCTCTGTTTCCTCTCCTGCCTGCAACCAGGTTCTATCTGATCATGTCTTAAAGGGATTGTTTGATTTTCCCAAGAACGGGGCTAAAAGAGCTGCTGGGGAAACCAGTTCTCTTAGGTCTGGCTGCAGCAAGGATGAGGCTGGAAACTGCTCTCAAATGACTTCCATATATGGTTCTAAGCTTAGTTCATGGGTTGAGAATGGTAGTAGTGTGAAACGTGAAAGCAGCGTTTCAACTGGATACTCTAAGAGACCGGAAGAAGTTTGCAAATCAAATAGGAAAAGGCTTAAACCTGGAGAGAATCCCAGACCTCGGCCTAAAGATCGCCAAATGATTCAAGATCGTGTTAAAGAGTTAAGGGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGCACTTCTGGAAAAGACCATCAAGCATATGCTTTTCCTGCAAAGTGTAACAAAGCATGCTGACAAGTTGAAACAGACAGGGGAATCTAAGATTGTTAGTAAAGAAGGTGGGTTGCTATTAAAAGATAACTTCGAGGGAGGGGCTACATGGGCATATGAGGTTGGCTCGCAATCTATGGTTTGTCCAATCATTGTCGAGGATCTTAATCCACCTCGTCAGATGCTAGTAGAGATGCTTTGTGAGGAAAGGGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGGATTAGGATTAACCATCTTGAAGGGGGTTATGGAAGCTCGTAATGACAAGATCTGGGCACGCTTTGCAGTTGAGGCCAACAGGGATGTGACGAGGATGGAAATATTCATGTCACTGGTTCGTCTTTTGGATCAAACAGTGAAGGGTGGTGCAGCTTCATCGAACGCAACTGATAACAACATGATGATGTATCATTCTTTTCCACAAGCTACCCAGATAGCAGCAACTGGTAGGCCTAGTAGTTTGCAATGA 2850 0.42 MGFLLKEVLKTLCSRNRWSYAVFWKIGCNNSKLLIWEDHYYEPLPSPFPPRHVGMSNFPYRDGEGCWFSSESQLGIQEEDRVGGLINKMMLNNSVSIAGEGMVGRATFTGNYQWILMNNFSRDAYPPQVYTELHYQFSAGMQTVAVIPVLPHGVVQFGSLLPIMEDIGFVNDVKNLILQLGCVPGALLSEDYSAKVSSERLGVPVTIDPPVVTSKCTPSAANGSNQLTDSTIASRSIAPSPHPPRQEIDNYQASVLTPQTYDQNQIFDSICQPKSHSMIKTIAYGQQKKTVVHAEAKVIPTNFDSCMQQPSAYNSRSAFNELAGFNQSNLSCNLNYMEQQTSGVGRQSHVNPNMNPSSASNMPQLKTGAGKILEQNQSSGGSSLFGGIPMCGGSNLLRTNMINCSVSNSPKVPPTSEFSGSHKLEFGLQNNNSTTDAGLCSVPTFCNQSVTSHVNLENSAQKNLPIDLKHAFVSTEQRIPDDLLHTALNIPSLHLEENEPMRDHIPGFVQDCLNKDVTGMVKMNVKHEDTYTQLPSGDDLFDVLGVDLKRQLLNGNWDNLLATDSEANRENLDKKATCMNLQGVRPDNSYSVKEAISDSGIFSGTGTDHLLDAVVSKAQSAPKQSSDEISCRTTLTRVSTASVSSPACNQVLSDHVLKGLFDFPKNGAKRAAGETSSLRSGCSKDEAGNCSQMTSIYGSKLSSWVENGSSVKRESSVSTGYSKRPEEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTVKGGAASSNATDNNMMMYHSFPQATQIAATGRPSSLQ 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01662 949 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 943 IPR043561 GO:0003700|GO:0006355
Viun11g01662 949 MobiDBLite consensus disorder prediction 218 237 - -
Viun11g01662 949 MobiDBLite consensus disorder prediction 726 750 - -
Viun11g01662 949 MobiDBLite consensus disorder prediction 708 722 - -
Viun11g01662 949 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 176 IPR025610 -
Viun11g01662 949 CDD bHLH_AtLHW_like 740 809 - -
Viun11g01662 949 MobiDBLite consensus disorder prediction 218 247 - -
Viun11g01662 949 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 736 785 IPR011598 GO:0046983
Viun11g01662 949 MobiDBLite consensus disorder prediction 708 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01662 Viun-Chr11 32906075 32912478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01662 538 924 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 54.337 1.58e-119 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01662 - - gmx:100786351 1549.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03162 5 42589263 42593562 Viun11g01662 11 32906075 32912478 PCT