Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01629 ATGTTCAACGGTATGATGGATCCCGATTTGATAAGAATCGCTCAGGAGCATATGAGTCGCATGTCACCTGCTGAGTTGGCTCGGATCCAACAACAGATGATGTCTAATCCAGAGCTGATGAGGATGGCCTCGGAGAGCATGAAGAACATGAGTTCTGAGGACTTTAAACTTGCTGCTGAGCAGTTAAAGCATACTCGCCCGGAAGAAATGGCTGAGATTGGTGAGAAGATGGCCAATGCGTCCCCTGATGAAGTGGCAGCGATGCGATCCCGGGTTGATGCCCAGATCAAATATCAGTTGAGTGCAGCTGAGATGTTGAAGAAGCAGGGCAATGAACTTCATAGTCAAGGAAAGTTCAGTGAAGCTTTGAAGAAGTATATGCTTGCTAAAGAAAACATCAAAGAGATTCCATCTTTTCAAAGTAGAAAGCTTCTTTTGGCATGTTCTCTCAACTTGATGTCCTGTTACTTGAAGACAAGGCAGTATAATGAGTGCATAAAAGAAGGTTCTGAGGTTTTGGCATATGATGCGAAGAATCTTAAGGCTCTTTATCGAAGAGGTCAAGCATATAAGGAACTAGGTCGACTAAATGATGCTGTTTCTGATCTGAGCAAGGCGCATGAAGTGTCCCCTGATGATGATACAGTTACAGAGCTTTTACGGGATACCAAGGAAAAATTGACAATGGGAGGTGGTGAGCAATCGACTAGCGGACTAGTAATCGAAGAAATAACCGAAGAAGTCGAGGATGTACCTCCTAAAAGCTCTTTGGAACAAACAGTGGTTCAAAAAAAATCTGGTGACACCACTAAGAGTACAAGTACAGTTAACAATGGAAATTCCACATCAAATGCAGACAGTTTAGATGCATTGAGAAAAGATCCTGAAGCTGTCAGGTCATTCCAGAACTTCATTCAAAACACGAATCCTGCCACATTGGCTTCTTTGAATGCTGGACAATTCAAAGATGTGTCCCCAGATATGATCAAAACCACCTCTGATGTAATTAGTAAGATGTCACCTGATGAACTGCAAAAAATGCTTGACATGGCTTCTTCATTTCAAGGGGACAACCAATTCTTTAGAGGAGGTCCCCCTGATTCTTCTTTCAACCCGGGATCAATGCCTCCCAATGTCACACCTGACATGTTTAAAGCAGCAAGTGATATGATAAGTAAAATGCCAGCTGATGACCTCAAGAAGATGTTTGAAATGGCATCATCACTGAAAGGGAAGGAATCTATTCCATCAGCAGCAGCAGTAGATGAGATCCAAAGAAATGTTTATCAGTCGAACATGCCATCATCAAGTACTAATGAAACTACTAATTATGGGGAATCAAGTTCTTCTCATAATGTGTTTTCAAATATGAGAAGTGGTTCTCAGTCAAACTTTCCTTCCTCGAGTACTGATCTACAAGAACAGATGAGAAACCAGATGAAAGATCCAGCCATGCGGCAGATGTTCACATCCATGATTAAAAATATGAGCCCAGAAATGATGGCAAACATGGGTGAACAATTTGGTGTTAAGCTTTCACCAGAAGAGGCAGCAAGAGCTCAGAAAGCCGTCTCATCCATGTCACCAGAGAGCTTGGATAAAATGATGCTTTGGGCAGACAGGATTCAAAGAGGAGTTGAATCTGCAAAAAAGACAAAGAACTGGCTGCTAGGGAAGCCTGGCATGATCTTTGCAATATGCATGCTCATTTTGGCTATCATTCTTCACCGGTTAGGCTTCATTGGTGGCTAG 1752 0.4241 MFNGMMDPDLIRIAQEHMSRMSPAELARIQQQMMSNPELMRMASESMKNMSSEDFKLAAEQLKHTRPEEMAEIGEKMANASPDEVAAMRSRVDAQIKYQLSAAEMLKKQGNELHSQGKFSEALKKYMLAKENIKEIPSFQSRKLLLACSLNLMSCYLKTRQYNECIKEGSEVLAYDAKNLKALYRRGQAYKELGRLNDAVSDLSKAHEVSPDDDTVTELLRDTKEKLTMGGGEQSTSGLVIEEITEEVEDVPPKSSLEQTVVQKKSGDTTKSTSTVNNGNSTSNADSLDALRKDPEAVRSFQNFIQNTNPATLASLNAGQFKDVSPDMIKTTSDVISKMSPDELQKMLDMASSFQGDNQFFRGGPPDSSFNPGSMPPNVTPDMFKAASDMISKMPADDLKKMFEMASSLKGKESIPSAAAVDEIQRNVYQSNMPSSSTNETTNYGESSSSHNVFSNMRSGSQSNFPSSSTDLQEQMRNQMKDPAMRQMFTSMIKNMSPEMMANMGEQFGVKLSPEEAARAQKAVSSMSPESLDKMMLWADRIQRGVESAKKTKNWLLGKPGMIFAICMLILAIILHRLGFIGG 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01629 583 MobiDBLite consensus disorder prediction 256 287 - -
Viun11g01629 583 MobiDBLite consensus disorder prediction 429 475 - -
Viun11g01629 583 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Viun11g01629 583 SMART tpr_5 180 213 IPR019734 GO:0005515
Viun11g01629 583 SMART tpr_5 146 179 IPR019734 GO:0005515
Viun11g01629 583 SMART tpr_5 103 136 IPR019734 GO:0005515
Viun11g01629 583 MobiDBLite consensus disorder prediction 248 287 - -
Viun11g01629 583 SUPERFAMILY TPR-like 96 225 IPR011990 GO:0005515
Viun11g01629 583 Gene3D Tetratricopeptide repeat domain 88 231 IPR011990 GO:0005515
Viun11g01629 583 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 4 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01629 Viun-Chr11 32580079 32585375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01629 99 227 Calmodulin-binding Proteins AT5G48570 36.296 4.88e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01629 - - gmx:100793234 967.222