Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01596 ATGGAGAAACAGAAAATGGGGGTGCTAAGGGCTGCAATTGGAGATGCAATTTTGACATCAATCTGGGTTTTCATCATGTCAACTTTGAGAATCGCTTCAACAGAGGTAGCACTTTTCCTCAGCCTCCAACCCCTTTCACTCGCAGGTCTCTTCATCACCACAGTTCTGAACACCTTCTGTGTGCTCACCGTAAGCTTCATCGGAGGTGTGTTAGGCGGTGCCAGCTTCAACCCTTCAACCACAGTTTCATTCTACACTGCAGGTCTCAGACCCGATTCATCTCTTTCATCAATGGCTGTTAGGTTCCCTGCTCAGGCATTCGGTGGCGCTGTGGGAGCCAAGGCTCTTGTTCTGGTGATGCCATCACAGTACAAGCACATGCTGAAAGGTCCTTTTTTGAAGGTGGATTTGCACACCGGTGCCCTTGCTGAGGGGTTGTTGACCTTCACTCATAACATGGCTATTCTCTTTTTGGTGCTGAGGGGTCCCAAGAACCCTTTTTTGAAGGTCTATTTGCTTTCTGTTGCTACTGCTGCTTTGGTTATCCCTGGTTCTGGGTTCACTGGACCTTCCATGAACCCTGCCAATGCCTTTGGATGGGCCTTTGTGAACAACAAGCACAACACTTTGGAGCAGTTTTATGTGTATTGGGTGTGCCCTTTCTTAGGGGCGTCCTCTGCAGCTTTCATCTTCAGGTCTTTGTTCATGGCACCCATCAAACAGAAGAAGGCTTGA 735 0.4857 MEKQKMGVLRAAIGDAILTSIWVFIMSTLRIASTEVALFLSLQPLSLAGLFITTVLNTFCVLTVSFIGGVLGGASFNPSTTVSFYTAGLRPDSSLSSMAVRFPAQAFGGAVGAKALVLVMPSQYKHMLKGPFLKVDLHTGALAEGLLTFTHNMAILFLVLRGPKNPFLKVYLLSVATAALVIPGSGFTGPSMNPANAFGWAFVNNKHNTLEQFYVYWVCPFLGASSAAFIFRSLFMAPIKQKKA 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01596 244 PANTHER AQUAPORIN SIP1-1 6 243 IPR044222 GO:0015250
Viun11g01596 244 SUPERFAMILY Aquaporin-like 5 238 IPR023271 -
Viun11g01596 244 Gene3D Glycerol uptake facilitator protein. 2 243 IPR023271 -
Viun11g01596 244 Pfam Major intrinsic protein 4 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun11g01596 244 PRINTS Major intrinsic protein family signature 57 81 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun11g01596 244 PRINTS Major intrinsic protein family signature 10 29 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun11g01596 244 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun11g01596 244 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun11g01596 244 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01596 Viun-Chr11 32396886 32397867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01596 6 235 Major Intrinsic Protein MIP AT3G04090 45.652 1.18e-60 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01596 K09875 - gmx:100797126 396.356