Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01532 ATGGTGAACACCAAGAGAAAGACCAGAAGGATAGTTATCCTTAACTGGTCCTCCAGTTTCATGCTGTCTATCTTCCTCTTCTGCTCATTGCTTTTCACTTTTAGTTTTAAGCATTGCTCAGCCAAAGATGCTATAACCATTAACAACTTCTTGCAAGATGGGGAAGGGGATACTCTAATTTCAAAAGGAGGAAAATTTGAGCTGGGATTTTTCACTCCTAATGGCAGCTCTAGTGGGAGAAGATATGTGGGAATATGGTACTACAAGGTGACTCCTTTAATAGTTGTGTGGGTTGCTAACCGAGACAACCCACTTCTAGATTCTTGGGGTGCTTTTGGCATTGGAGAAGATGGGAATCTAAAGATTTTGGACAGAAGGGGGAAAGCCTACTGGGGCACAAAACTTGAAGGATCATCTTCACAACACAGAACAGTGAAGATAATGGACAGTGGGAACCTTATTGTTAGTGATGAAGTTGAAGGCCAAGGGGATCATCTGGTGAAGATTCTGTGGCAGAGTTTTGCTAATCCTACAGACACATTCCTTCCTGGAATGAAAATGGAAGGCAATTTAGCACTGACATCATGGAGAAGTTATGAAGACCCTGCACCAGGGAACTTCACTTTTGTGCACTGTCAAGGGGAGAACCAGTTCGTGATATGGAAGAGGTCCATCAAGTATTGGAAAAGCAGTGTTACAAGTAGGTTTTCAGGAAGTGATGAGATGTCTCCAGCAATATCTTACTTGCTGTCAAATTTCACCCTGAGAGTATCCCCAAACGACACTGTTCCCTTTCTGACTCCAGCACTATATCGTGACACAAGGTTGGTCATGACTCACTGGGGTCAACTTAAGTACATGAAGATGGATTCAGAGAAAGTGTGGTTGTTGGTTTGGGTGGAGCCAAGAGATAGATGCAGTGTGTTCAATGCCTGTGGAAACTTTGGAAGCTGTAATAGCAAGTATGATTCCATGTGCAAGTGTTTGCCTGGGTACAAGCCTAATTCTATTGAGAGTTGGAATGCTGGAGACTTTTCAGGTGGATGCAGCAGAAAAACAAATGTCTGCAGTGGTGATGCTAAGAAAGCTACATTTTTGAGTTTGAAAATGATGAAAGTAGGGAACCCGGATGCTCAATTTAATGCCAAGAATGAAGAGGAATGCGAATCAGAGTGCCTCAATAATTGCCAGTGCTATGCATATTCGTATGAAAGCACTGAAAAGGATACTGTTTGCTGGATTTGGTATGAGGACTTGAACAATCTTGAAGAACAGTACGAGAATGGGTGTGACCTGCATGTTCGCATGGCATTTTCTGATATTGAATCCACTGGGAACAGCTGTGGAACTTGTGGTACAAATTTCATTCCATATCCCTTAAGCACAGGACCAAGTTGTGGTGACCCCATGTACTTCAGTTTTCAATGCAACAACTCTTCTGGTGAGCTTGATTTTAAAACTCCTGGGGGAACCTATGAAGTGATTAGCATAAACCCAGACACACGAAAGTTCTTGATCCACAGAAAAGATGTACTTAACTGTGATCAGGGTTCAAGGGATAAGTTTCTGTCTCTCAACCAGTCATTTCCATTTCACCTTACTGGCTATTGTCATGCTGATCCAAGCATTTTTAGTTCTAATGCTTCCATGAAACAAGGAGTAGAAATAGAATTCAGTTGGGAGCCCCCAATTGAGCCTATGTGCTCTTCGTTATTGGACTGCAAGGAATGGCCAAATTCAACTTGCAACACTACCAGAGATGGCAAGAAGAGATGTCTTTGCAACACAAACTTTATTTGGGATGGATTGAAATTAAACTGCACTCAAGAAGGCAATAATATCTATCAATCAGAAAGGACACTGTCCTTACCAAAGATCATTGTAATTACTTTTACAACTGCGATTGGTTTAATTCTTCTGTCAACTACTGTTACATGTGTTTACTTGAGGAAAAGAAGACAGAGCAAATCACAAGATAGCAGGGGATATGTTCAGAAAAACTCAGGGATTAACTTGTATGACAGTGACAGATATGTCAGAGAATTGATTGAATCTGGTAGGTTCAAAGAAGATGATGCACAGGCCATAGATATTCCATTTTTCCATTTAGAAAGCATACTAGGGGCCACTAACAATTTTGCAAATGCCAACAAGCTTGGACAAGGAGGGTTTGGTCCTGTCTACAAGGGAAAATTTCCTGGAGGACAAGAAATAGCAGTGAAGAGACTCTCAAGTTGTTCTGGACAAGGTTCGGAAGAATTTAAAAACGAAGTTGTGTTGATTGCAAAGCTTCAACACAGAAACCTGGTGAGACTTCTGGGGTACTGTGTGGAAGGAGATGAAAAGATGCTGGTATATGAATATATGCCAAATAGAAGCTTGGATGCTTTCATTTTTGACGAGAAGCTGTGTGTTCTATTAGACTGGGATGTGCGCTTCAAGATTATTTTGGGAATTGCTCGAGGGCTCCTTTACTTGCATGAAGATTCTAGGTTGAGGATTATTCATAGGGACTTGAAAACAAGTAACATTCTTCTAGATGAAGAGAAGAATCCTAAAATCTCAGACTTTGGCTTGGCCAGAATATTTGGAGGAAAAGAGACAGTAGCTAACACAGAAAGAGTGGTTGGAACATATGGATATATGTCTCCAGAGTATGCTCTTGATGGACATTTTTCAGTCAAATCTGACGTCTTTAGCTTTGGTGTGGTGGTACTTGAGATTATCAGTGGGAAAAGGAACACAGGATTTTATCAAGCAGAACATAAACTGAGTCTTCTGGGATATGCATGGCTTTTGTGGAAAGAAGGAAGGGAACTGGAATTCATGGATCAAACACTAAGTGAAACATGCAATGCAGATGAATGTTTGAAATGTGTGAATGTGGGGCTTTTGTGCTTACAAGAAGATCCAAATGAACGTCCTACAATGTCAAATGTGGTGTTCATGCTTGGTAGTGAATCTAACACTCTTCCAAGTCCTAAGGAACCAGCCTTTGTTATCAGAAGATGCCCTTCAAGTAGAGCATCTACTTCGAGTAAACTTGAAACGTTTTCACGTAATGAATTGACGGTCACTATAGAACATGGGAGGTAG 3096 0.4105 MVNTKRKTRRIVILNWSSSFMLSIFLFCSLLFTFSFKHCSAKDAITINNFLQDGEGDTLISKGGKFELGFFTPNGSSSGRRYVGIWYYKVTPLIVVWVANRDNPLLDSWGAFGIGEDGNLKILDRRGKAYWGTKLEGSSSQHRTVKIMDSGNLIVSDEVEGQGDHLVKILWQSFANPTDTFLPGMKMEGNLALTSWRSYEDPAPGNFTFVHCQGENQFVIWKRSIKYWKSSVTSRFSGSDEMSPAISYLLSNFTLRVSPNDTVPFLTPALYRDTRLVMTHWGQLKYMKMDSEKVWLLVWVEPRDRCSVFNACGNFGSCNSKYDSMCKCLPGYKPNSIESWNAGDFSGGCSRKTNVCSGDAKKATFLSLKMMKVGNPDAQFNAKNEEECESECLNNCQCYAYSYESTEKDTVCWIWYEDLNNLEEQYENGCDLHVRMAFSDIESTGNSCGTCGTNFIPYPLSTGPSCGDPMYFSFQCNNSSGELDFKTPGGTYEVISINPDTRKFLIHRKDVLNCDQGSRDKFLSLNQSFPFHLTGYCHADPSIFSSNASMKQGVEIEFSWEPPIEPMCSSLLDCKEWPNSTCNTTRDGKKRCLCNTNFIWDGLKLNCTQEGNNIYQSERTLSLPKIIVITFTTAIGLILLSTTVTCVYLRKRRQSKSQDSRGYVQKNSGINLYDSDRYVRELIESGRFKEDDAQAIDIPFFHLESILGATNNFANANKLGQGGFGPVYKGKFPGGQEIAVKRLSSCSGQGSEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLVYEYMPNRSLDAFIFDEKLCVLLDWDVRFKIILGIARGLLYLHEDSRLRIIHRDLKTSNILLDEEKNPKISDFGLARIFGGKETVANTERVVGTYGYMSPEYALDGHFSVKSDVFSFGVVVLEIISGKRNTGFYQAEHKLSLLGYAWLLWKEGRELEFMDQTLSETCNADECLKCVNVGLLCLQEDPNERPTMSNVVFMLGSESNTLPSPKEPAFVIRRCPSSRASTSSKLETFSRNELTVTIEHGR 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01532 1031 Gene3D Phosphorylase Kinase; domain 1 679 788 - -
Viun11g01532 1031 ProSiteProfiles EGF-like domain profile. 302 338 IPR000742 -
Viun11g01532 1031 Gene3D - 37 176 IPR036426 -
Viun11g01532 1031 Pfam PAN-like domain 360 421 IPR003609 -
Viun11g01532 1031 CDD B_lectin 48 177 IPR001480 -
Viun11g01532 1031 Pfam Protein tyrosine and serine/threonine kinase 716 982 IPR001245 GO:0004672|GO:0006468
Viun11g01532 1031 SMART ntp_6 360 436 IPR003609 -
Viun11g01532 1031 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 789 992 - -
Viun11g01532 1031 SUPERFAMILY Protein kinase-like (PK-like) 696 984 IPR011009 -
Viun11g01532 1031 ProSiteProfiles PAN/Apple domain profile. 356 430 IPR003609 -
Viun11g01532 1031 CDD PAN_AP_plant 356 437 - -
Viun11g01532 1031 CDD STKc_IRAK 719 984 - -
Viun11g01532 1031 ProSiteProfiles Bulb-type lectin domain profile. 44 168 IPR001480 -
Viun11g01532 1031 SMART serkin_6 713 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01532 1031 Pfam S-locus glycoprotein domain 233 335 IPR000858 GO:0048544
Viun11g01532 1031 Gene3D Transferase(Phosphotransferase) domain 1 789 994 - -
Viun11g01532 1031 Pfam Domain of unknown function (DUF3403) 986 1031 IPR021820 GO:0004674
Viun11g01532 1031 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 678 788 - -
Viun11g01532 1031 Pfam D-mannose binding lectin 95 191 IPR001480 -
Viun11g01532 1031 SMART blect_4 50 177 IPR001480 -
Viun11g01532 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Viun11g01532 1031 ProSiteProfiles Protein kinase domain profile. 713 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01532 1031 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 140 1010 - -
Viun11g01532 1031 SUPERFAMILY alpha-D-mannose-specific plant lectins 95 201 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01532 Viun-Chr11 31529604 31534708 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01532 706 1002 Receptor kinase-like Gene Family AT4G23230 59.933 7.47e-123 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g01532 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01532 - - var:108339799 2005.72