Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01531 ATGGTGAACACCAAGAGAAAGACCAGAAGGATAGTTATCCTTAACTGGTCCTCCAGTTTCATGCTGTCTATCTTCCTCTTCTGCTCATTGCTTTTCACTTTTAGTTTTAAGCATTGCTCAGCCAAAGATGCTATAACCATTAACAACTTCTTGCAAGATGGGGAAGGGGATACTCTAATTTCAAAAGGAGGAAAATTTGAGCTGGGATTTTTCACTCCTAATGGCAGCTCTAGTGGGAGAAGATATGTGGGAATATGGTACTACAAGGTGACTCCTTTAATAGTTGTGTGGGTTGCTAACCGAGACAACCCACTTCTAGATTCTTGGGGTGCTTTTGGCATTGGAGAAGATGGGAATCTAAAGATTTTGGACAGAAGGGGGAAAGCCTACTGGGGCACAAAACTTGAAGGATCATCTTCACAACACAGAACAGTGAAGATAATGGACAGTGGGAACCTTATTGTTAGTGATGAAGTTGAAGGCCAAGGGGATCATCTGGTGAAGATTCTGTGGCAGAGTTTTGCTAATCCTACAGACACATTCCTTCCTGGAATGAAAATGGAAGGCAATTTAGCACTGACATCATGGAGAAGTTATGAAGACCCTGCACCAGGGAACTTCACTTTTGTGCACTGTCAAGGGGAGAACCAGTTCGTGATATGGAAGAGGTCCATCAAGTATTGGAAAAGCAGTGTTACAAGTAGGTTTTCAGGAAGTGATGAGATGTCTCCAGCAATATCTTACTTGCTGTCAAATTTCACCCTGAGAGTATCCCCAAACGACACTGTTCCCTTTCTGACTCCAGCACTATATCGTGACACAAGGTTGGTCATGACTCACTGGGGTCAACTTAAGTACATGAAGATGGATTCAGAGAAAGTGTGGTTGTTGGTTTGGGTGGAGCCAAGAGATAGATGCAGTGTGTTCAATGCCTGTGGAAACTTTGGAAGCTGTAATAGCAAGTATGATTCCATGTGCAAGTGTTTGCCTGGGTACAAGCCTAATTCTATTGAGAGTTGGAATGCTGGAGACTTTTCAGGTGGATGCAGCAGAAAAACAAATGTCTGCAGTGGTGATGCTAAGAAAGCTACATTTTTGAGTTTGAAAATGATGAAAGTAGGGAACCCGGATGCTCAATTTAATGCCAAGAATGAAGAGGAATGCGAATCAGAGTGCCTCAATAATTGCCAGTGCTATGCATATTCGTATGAAAGCACTGAAAAGGATACTGTTTGCTGGATTTGGTATGAGGACTTGAACAATCTTGAAGAACAGTACGAGAATGGGTGTGACCTGCATGTTCGCATGGCATTTTCTGATATTGAATCCACTGGGAACAGCTGTGGAACTTGTGGTACAAATTTCATTCCATATCCCTTAAGCACAGGACCAAGTTGTGGTGACCCCATGTACTTCAGTTTTCAATGCAACAACTCTTCTGGTGAGCTTGATTTTAAAACTCCTGGGGGAACCTATGAAGTGATTAGCATAAACCCAGACACACGAAAGTTCTTGATCCACAGAAAAGATGTACTTAACTGTGATCAGGGTTCAAGGGATAAGTTTCTGTCTCTCAACCAGTCATTTCCATTTCACCTTACTGGCTATTGTCATGCTGATCCAAGCATTTTTAGTTCTAATGCTTCCATGAAACAAGGAGTAGAAATAGAATTCAGTTGGGAGCCCCCAATTGAGCCTATGTGCTCTTCGTTATTGGACTGCAAGGAATGGCCAAATTCAACTTGCAACACTACCAGAGATGGCAAGAAGAGATGTCTTTGCAACACAAACTTTATTTGGGATGGATTGAAATTAAACTGCACTCAAGGCAATAATATCTATCAATCAGAAAGGACACTGTCCTTACCAAAGATCATTGTAATTACTTTTACAACTGCGATTGGTTTAATTCTTCTGTCAACTACTGTTACATGTGTTTACTTGAGGAAAAGAAGACAGAGCAAATCACAAGATAGCAGGGGATATGTTCAGAAAAACTCAGGGATTAACTTGTATGACAGTGACAGATATGTCAGAGAATTGATTGAATCTGGTAGGTTCAAAGAAGATGATGCACAGGCCATAGATATTCCATTTTTCCATTTAGAAAGCATACTAGGGGCCACTAACAATTTTGCAAATGCCAACAAGCTTGGACAAGGAGGGTTTGGTCCTGTCTACAAGGGAAAATTTCCTGGAGGACAAGAAATAGCAGTGAAGAGACTCTCAAGTTGTTCTGGACAAGGTTCGGAAGAATTTAAAAACGAAGTTGTGTTGATTGCAAAGCTTCAACACAGAAACCTGGTGAGACTTCTGGGGTACTGTGTGGAAGGAGATGAAAAGATGCTGGTATATGAATATATGCCAAATAGAAGCTTGGATGCTTTCATTTTTGACGAGAAGCTGTGTGTTCTATTAGACTGGGATGTGCGCTTCAAGATTATTTTGGGAATTGCTCGAGGGCTCCTTTACTTGCATGAAGATTCTAGGTTGAGGATTATTCATAGGGACTTGAAAACAAGTAACATTCTTCTAGATGAAGAGAAGAATCCTAAAATCTCAGACTTTGGCTTGGCCAGAATATTTGGAGGAAAAGAGACAGTAGCTAACACAGAAAGAGTGGTTGGAACATATGGATATATGTCTCCAGAGTATGCTCTTGATGGACATTTTTCAGTCAAATCTGACGTCTTTAGCTTTGGTGTGGTGGTACTTGAGATTATCAGTGGGAAAAGGAACACAGGATTTTATCAAGCAGAACATAAACTGAGTCTTCTGGGATATGCATGGCTTTTGTGGAAAGAAGGAAGGGAACTGGAATTCATGGATCAAACACTAAGTGAAACATGCAATGCAGATGAATGTTTGAAATGTGTGAATGTGGGGCTTTTGTGCTTACAAGAAGATCCAAATGAACGTCCTACAATGTCAAATGTGGTGTTCATGCTTGGTAGTGAATCTAACACTCTTCCAAGTCCTAAGGAACCAGCCTTTGTTATCAGAAGATGCCCTTCAAGTAGAGCATCTACTTCGAGTAAACTTGAAACGTTTTCACGTAATGAATTGACGGTCACTATAGAACATGGGAGGTAG 3093 0.4106 MVNTKRKTRRIVILNWSSSFMLSIFLFCSLLFTFSFKHCSAKDAITINNFLQDGEGDTLISKGGKFELGFFTPNGSSSGRRYVGIWYYKVTPLIVVWVANRDNPLLDSWGAFGIGEDGNLKILDRRGKAYWGTKLEGSSSQHRTVKIMDSGNLIVSDEVEGQGDHLVKILWQSFANPTDTFLPGMKMEGNLALTSWRSYEDPAPGNFTFVHCQGENQFVIWKRSIKYWKSSVTSRFSGSDEMSPAISYLLSNFTLRVSPNDTVPFLTPALYRDTRLVMTHWGQLKYMKMDSEKVWLLVWVEPRDRCSVFNACGNFGSCNSKYDSMCKCLPGYKPNSIESWNAGDFSGGCSRKTNVCSGDAKKATFLSLKMMKVGNPDAQFNAKNEEECESECLNNCQCYAYSYESTEKDTVCWIWYEDLNNLEEQYENGCDLHVRMAFSDIESTGNSCGTCGTNFIPYPLSTGPSCGDPMYFSFQCNNSSGELDFKTPGGTYEVISINPDTRKFLIHRKDVLNCDQGSRDKFLSLNQSFPFHLTGYCHADPSIFSSNASMKQGVEIEFSWEPPIEPMCSSLLDCKEWPNSTCNTTRDGKKRCLCNTNFIWDGLKLNCTQGNNIYQSERTLSLPKIIVITFTTAIGLILLSTTVTCVYLRKRRQSKSQDSRGYVQKNSGINLYDSDRYVRELIESGRFKEDDAQAIDIPFFHLESILGATNNFANANKLGQGGFGPVYKGKFPGGQEIAVKRLSSCSGQGSEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLVYEYMPNRSLDAFIFDEKLCVLLDWDVRFKIILGIARGLLYLHEDSRLRIIHRDLKTSNILLDEEKNPKISDFGLARIFGGKETVANTERVVGTYGYMSPEYALDGHFSVKSDVFSFGVVVLEIISGKRNTGFYQAEHKLSLLGYAWLLWKEGRELEFMDQTLSETCNADECLKCVNVGLLCLQEDPNERPTMSNVVFMLGSESNTLPSPKEPAFVIRRCPSSRASTSSKLETFSRNELTVTIEHGR 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01531 1030 ProSiteProfiles EGF-like domain profile. 302 338 IPR000742 -
Viun11g01531 1030 Pfam PAN-like domain 360 421 IPR003609 -
Viun11g01531 1030 SUPERFAMILY Protein kinase-like (PK-like) 695 983 IPR011009 -
Viun11g01531 1030 CDD B_lectin 48 177 IPR001480 -
Viun11g01531 1030 Pfam Protein tyrosine and serine/threonine kinase 715 981 IPR001245 GO:0004672|GO:0006468
Viun11g01531 1030 Gene3D Transferase(Phosphotransferase) domain 1 788 993 - -
Viun11g01531 1030 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 677 787 - -
Viun11g01531 1030 SMART ntp_6 360 436 IPR003609 -
Viun11g01531 1030 ProSiteProfiles Protein kinase domain profile. 712 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01531 1030 SMART serkin_6 712 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01531 1030 Gene3D Phosphorylase Kinase; domain 1 678 787 - -
Viun11g01531 1030 ProSiteProfiles PAN/Apple domain profile. 356 430 IPR003609 -
Viun11g01531 1030 Gene3D - 37 176 IPR036426 -
Viun11g01531 1030 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 141 1009 - -
Viun11g01531 1030 CDD PAN_AP_plant 356 437 - -
Viun11g01531 1030 Pfam S-locus glycoprotein domain 233 335 IPR000858 GO:0048544
Viun11g01531 1030 ProSiteProfiles Bulb-type lectin domain profile. 44 168 IPR001480 -
Viun11g01531 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Viun11g01531 1030 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 788 991 - -
Viun11g01531 1030 Pfam Domain of unknown function (DUF3403) 985 1030 IPR021820 GO:0004674
Viun11g01531 1030 CDD STKc_IRAK 718 983 - -
Viun11g01531 1030 Pfam D-mannose binding lectin 95 191 IPR001480 -
Viun11g01531 1030 SMART blect_4 50 177 IPR001480 -
Viun11g01531 1030 SUPERFAMILY alpha-D-mannose-specific plant lectins 95 201 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01531 Viun-Chr11 31529602 31534708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01531 705 1001 Receptor kinase-like Gene Family AT4G23230 59.933 7.01e-123 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g01531 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01531 - - var:108339799 2001.1