Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01529 ATGGTGAAAACCCCATCTTGTGAAAAAAGTGGAGCGGGGAAGGGTACTTGGACTCCGGAGGAAGATAGAAAATTAATTGCATATGTCACCAGATATGGTTTCTGGAATTGGAGACAACTTCCCAGGTTTGCAGGTTTAGCAAGATGTGGAAAAAGTTGTAGACTAAGATGGATGAATCATCTGAGGCCTAAAATCAAAAGAGCCAACTTCAGTTCAGAAGAAGAAGAATACATCATCAGAATGCACACAAAACTTGGTAACAGATGGTCTGCTATTGCGGCTGAGTTACCGGGAAGAACAGATTTGGAAGTAAAAAACCATTGGCACACCACTCTCAAGAAAAGGTCTCAATAA 354 0.4124 MVKTPSCEKSGAGKGTWTPEEDRKLIAYVTRYGFWNWRQLPRFAGLARCGKSCRLRWMNHLRPKIKRANFSSEEEEYIIRMHTKLGNRWSAIAAELPGRTDLEVKNHWHTTLKKRSQ 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01529 117 CDD SANT 69 112 IPR001005 -
Viun11g01529 117 Pfam Myb-like DNA-binding domain 17 76 - -
Viun11g01529 117 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Viun11g01529 117 CDD SANT 16 61 IPR001005 -
Viun11g01529 117 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 115 - -
Viun11g01529 117 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Viun11g01529 117 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Viun11g01529 117 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Viun11g01529 117 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Viun11g01529 117 SMART sant 13 63 IPR001005 -
Viun11g01529 117 SMART sant 66 114 IPR001005 -
Viun11g01529 117 Gene3D - 69 115 - -
Viun11g01529 117 FunFam MYB-related transcription factor 13 66 - -
Viun11g01529 117 Gene3D - 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01529 Viun-Chr11 31514660 31515671 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01529 1 115 MYB Transcription Factor Family AT2G31180 66.087 1.09e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Viun11g01529 Myb_DNA-bind_6 2.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01529 K09422 - vun:114168966 253.832