Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01523 ATGTGGAACAAGACACCACCTTTGTTATGGCTTTCTCTCCTCATCACATGCTTCTTCTCTTTCCACAGTTCTACATCACTCGCAGCTTTGACCACCATCTCAGAAAATCAATCTCTCTCCGGGGATCAAACTCTTGTCTCCCAAAATGGAACCTTTGAACTGGGTTTCTTCACCACAGGTAACACCTCTAAATACTATATAGGCATGTGGTACAGAAAAATACCTCAAAGAACTTATGTTTGGGTTGCAAATAGAGAAGACCCAGTTTCTGATAAGAATTCTGCTAAATTAACAATATTGGATGGTAATTTAGTGGTCTTAGACCAGTCCCAAAATATAGTTTGGTCAACGAATTTGAGTTCTCCTAGCTCGGGTTCTGTGCTAGCCCTGCTTCTAGATTCTGGGAATCTTATATTAAGCGATAGGGCTAATGCAACAGCAACTGATGCTATGTGGCAGAGTTTCGATCACCCCACCGACACGTGGCTTCCCGGAGGCAAGATAAGTTTGAACAACAAAACAAAGAAGCCGCAGTATCTGACTTCATGGAAGAATCTTGATGATCCTGCAACGGGAATGTTCTCTCTTGAACTAGACCCTGAAGGAAGCAATGCATATTTGATTCGTTGGAATAGAACTGAGCAGTATTGGACAAGTGGTTCTTGGAATGGACAAATTTTCAGCTTGGTTCCTGAGATGAGACTAAACTACATCTACAATTTCACCTTTGAGTCCAACGAGAACGAGAGCTACTTCACCTACTCCTTGTATAACGAGTCCATTATATCTCGCTTTTTCATGGATGTCTCGGGGCAGATTAAGCAACTGACGTGGCTGGACAATGCTCAGCAGTGGAATTTGTTCTGGTCTCAGCCAAGGCAACAGTGTGAAGTGTATGCTTTCTGTGGTGGATTTGGGAAATGCACTGAGAATTCCATGCCATATTGTAGTTGTTTAACTGGGTATGAGCCAAAGTCACAATCGGATTGGAATCTTTCGGATTACTCAGGGGGGTGTGTGAGAAAGACGGAGCTGCAATGTGCCTCACCAGACTCCTCTAACAAGGGCAGTGACAGGTTCCTTTCAATTCTCAACATGAAATTGCCTAATCATTCACAATCCATAGGAGCCGGGAATGTTGGGGAATGTGAATCAACATGCTTGAGTAACTGTTCTTGTACTGCATATGCTTATGACAACAATGGTTGTTCAATTTGGTATGGTGATCTCTTGAATCTGCAGCAGCTTACTCAAGATGACAGCAGTGGCCAGACTTTGTTTCTCAAACTTGCAGCGTCTGAGTTTCATGATTCTAAAAGCAATAAAGGGACACTCATTGGTGCGGTTGCTGGAGCTGTTGGTGGTGTGGTGGTTCTTCTGATTGTTTTGGTGTTTGTGATTCTGCGGCGCAGAAAGAGGCATGTTGGGATAGGAACATCTGTGGAGGGCTCATTGGTGGCATTTGGGTACAGGGATTTACAAAATGCTACTAAGAATTTCTCAGAGAAACTGGGAGGAGGGGGTTTTGGCTCTGTCTTCAAAGGAACATTGCCTGATTCCAGTGTCATTGCAGTGAAGAAGCTTGAAAGCATTAGCCAAGGTGAGAAGCAGTTCAGAACGGAAGTGAGCACAATTGGGACAGTCCAACATGTGAATCTTGTAAGGCTTCGCGGGTTCTGTTCGGAAGGTACTAAGAAACTTCTGGTTTATGATTACATGCCAAATGGTTCCTTGGATTCCAAAATGTTTCAGGAAGATAGATCAAAGGTGTTGGAGTGGAAAATGAGGTACCAAATTGCTCTTGGAACAGCAAGGGGGTTGAATTATCTTCACGAGAAGTGTAGAGACTGCATCATACACTGTGATGTGAAGCCAGAAAACATTCTCCTTGATGCTGATTTTGTTCCAAAGGTGGCAGATTTTGGCCTTGCAAAGCTGGTTGGAAGGGACTTCAGCAGAGTCCTCACAACCATGAGAGGGACAAGAGGTTATCTTGCCCCAGAGTGGATTTCAGGTGTGGCTATCACTGCCAAAGCTGATGTTTACAGCTATGGAATGATGCTTTTTGAGTTTGTGTCAGGTAGGAGGAACTCTGAGGCCTCGGAAGATGGCCAAGTGAGGTTCTTCCCTACTTTTGCTGCAAACACTGTCCACCAAGAGGGGAATGTGCTTGGCTTGTTGGACCCTAGGTTGGAGGGAAATGCTGACATTGAAGAGGTCATTAGAGTCATCAAAATTGCTTCATGGTGTGTCCAAGATGATGAATCTCACAGGCCTTCCATGGGTCAGGTGGTTCAAATCCTTGAAGGGTTCTTGGATGTGACTTTGCCTCCAATTCCAAGGACCCTCCAAGCCTTTGTTGACAACCATGAGAACATAGTTTTCTTCACTGACTCCAGCTCCACACAGAGTTCACAGGTAAAGAGTAACACCTCAACTGCTTCCTCTCAAGCCAAGAGCAATACCTCATCCAAAAATTCTCAGTCCTCATGA 2493 0.4436 MWNKTPPLLWLSLLITCFFSFHSSTSLAALTTISENQSLSGDQTLVSQNGTFELGFFTTGNTSKYYIGMWYRKIPQRTYVWVANREDPVSDKNSAKLTILDGNLVVLDQSQNIVWSTNLSSPSSGSVLALLLDSGNLILSDRANATATDAMWQSFDHPTDTWLPGGKISLNNKTKKPQYLTSWKNLDDPATGMFSLELDPEGSNAYLIRWNRTEQYWTSGSWNGQIFSLVPEMRLNYIYNFTFESNENESYFTYSLYNESIISRFFMDVSGQIKQLTWLDNAQQWNLFWSQPRQQCEVYAFCGGFGKCTENSMPYCSCLTGYEPKSQSDWNLSDYSGGCVRKTELQCASPDSSNKGSDRFLSILNMKLPNHSQSIGAGNVGECESTCLSNCSCTAYAYDNNGCSIWYGDLLNLQQLTQDDSSGQTLFLKLAASEFHDSKSNKGTLIGAVAGAVGGVVVLLIVLVFVILRRRKRHVGIGTSVEGSLVAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLPDSSVIAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGTKKLLVYDYMPNGSLDSKMFQEDRSKVLEWKMRYQIALGTARGLNYLHEKCRDCIIHCDVKPENILLDADFVPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEASEDGQVRFFPTFAANTVHQEGNVLGLLDPRLEGNADIEEVIRVIKIASWCVQDDESHRPSMGQVVQILEGFLDVTLPPIPRTLQAFVDNHENIVFFTDSSSTQSSQVKSNTSTASSQAKSNTSSKNSQSS 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01523 830 ProSiteProfiles PAN/Apple domain profile. 347 431 IPR003609 -
Viun11g01523 830 ProSiteProfiles Protein kinase domain profile. 498 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01523 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 223 IPR036426 -
Viun11g01523 830 CDD PAN_AP_plant 343 431 - -
Viun11g01523 830 ProSiteProfiles Bulb-type lectin domain profile. 30 152 IPR001480 -
Viun11g01523 830 Gene3D Phosphorylase Kinase; domain 1 465 572 - -
Viun11g01523 830 SMART blect_4 36 158 IPR001480 -
Viun11g01523 830 SUPERFAMILY Protein kinase-like (PK-like) 484 804 IPR011009 -
Viun11g01523 830 Pfam Protein kinase domain 501 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01523 830 PANTHER OS07G0415500 PROTEIN 11 780 - -
Viun11g01523 830 PIRSF SRK 1 823 IPR024171 GO:0004674
Viun11g01523 830 SMART serkin_6 498 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01523 830 SMART ntp_6 355 430 IPR003609 -
Viun11g01523 830 FunFam Serine/threonine-protein kinase 465 572 - -
Viun11g01523 830 Pfam PAN-like domain 354 412 IPR003609 -
Viun11g01523 830 MobiDBLite consensus disorder prediction 802 830 - -
Viun11g01523 830 CDD B_lectin 36 158 IPR001480 -
Viun11g01523 830 FunFam Serine/threonine-protein kinase 25 155 - -
Viun11g01523 830 Gene3D - 26 155 IPR036426 -
Viun11g01523 830 Gene3D Transferase(Phosphotransferase) domain 1 573 775 - -
Viun11g01523 830 CDD STKc_IRAK 504 771 - -
Viun11g01523 830 Pfam D-mannose binding lectin 78 184 IPR001480 -
Viun11g01523 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Viun11g01523 830 Pfam S-locus glycoprotein domain 217 326 IPR000858 GO:0048544
Viun11g01523 830 FunFam Serine/threonine-protein kinase 573 776 - -
Viun11g01523 830 ProSitePatterns Protein kinases ATP-binding region signature. 504 527 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01523 Viun-Chr11 31467071 31470052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01523 481 778 Receptor kinase-like Gene Family AT5G20050 44.586 2.00e-78 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun11g01523 Pkinase 4.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01523 - - gmx:100782119 1394.79