Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01515 ATGAGACGGCGGTGGCAGGAGGCTCGCGTGGTGGTCTCGAGTGGTGGGCTCGCCGGAAGTCGCGGAGAGAAGAAGAAACAGCGACGATGGCAGCGCAACAGCGGCAGTGGCAGCGGCAGCACGAGAGGCGATGGCAGTGGCAGCACGAATTTGCAGAGAGAAATGGCAGCTGCATGCGAGGAAGAAGGGATAAAGCAAGGTGAAGAGGGTCAAAAAATGAATGATCTTTTCCAAATAGGAAAAAAAAGAAAAAGAAATGAGAGAAGCTATGCTGAAATAACTTTCTCAGTCATGAATGTCATGACTGAGTTTGAAGTTGCTGTTGAGGAGGATGTTGATCTTTACCGACAGGGAAAACTTGTCATTAATAAACTTAAGAAGTTGCCACTTTTGATCGAGGTCCTCTCAAAGAATCATCTTCAACAAGAGTTTTTAGATCAAGGATCGTTGACTGTATTAAAGAAATGGCTTGAGCCACATCCTCATGGAAGCTTGCCAAATCTAACCATACGCACAGAAATTTTGAAGATTTTGAATAATATAGATTTAGAGCACCATGATAGAAAGGAACAACTGAAGAATAGTGGCATTGGAAATGTAATCATGCTTCTATCAAAATCTGATGAAGAAATTAATATAAATAGGAAACTGGTCGAGGAATTGGTTAACAAATGGCTTCGATCCTTATACAATAATAAAGATACAATTTCATTTAGAAGATCAGAGCTTACAAAACAAGTGAAGAGCGCTCTCCCAAATCACCAACATATTAATAAAAAATTGCAAAAGTTGAAGACATCAGGCAGAAGCAGCTTCAAGCAGCAAAACCGATTTTGA 837 0.4098 MRRRWQEARVVVSSGGLAGSRGEKKKQRRWQRNSGSGSGSTRGDGSGSTNLQREMAAACEEEGIKQGEEGQKMNDLFQIGKKRKRNERSYAEITFSVMNVMTEFEVAVEEDVDLYRQGKLVINKLKKLPLLIEVLSKNHLQQEFLDQGSLTVLKKWLEPHPHGSLPNLTIRTEILKILNNIDLEHHDRKEQLKNSGIGNVIMLLSKSDEEININRKLVEELVNKWLRSLYNNKDTISFRRSELTKQVKSALPNHQHINKKLQKLKTSGRSSFKQQNRF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01515 278 Pfam TFIIS helical bundle-like domain 176 227 IPR017923 -
Viun11g01515 278 MobiDBLite consensus disorder prediction 32 50 - -
Viun11g01515 278 MobiDBLite consensus disorder prediction 1 50 - -
Viun11g01515 278 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 91 236 IPR035441 -
Viun11g01515 278 PANTHER PROTEIN IWS1 HOMOLOG 1 51 255 IPR044204 GO:0009742|GO:0032784
Viun11g01515 278 ProSiteProfiles TFIIS N-terminal domain profile. 151 232 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01515 Viun-Chr11 31323651 31327446 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Viun11g01515 Med26 7.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01515 K17498 - gmx:100801805 221.476