Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01512 ATGGAGTTTGACCTTGAAAACCCTTTGGAAAATCTTCACTCCGATGCTGTCTCTTTTCTCTTCCTCGTTGAATCTGACCACACCCCTTCACAGAATCATTCTCACACTCTCAAACCTGGAGATCTTGACATCTCTGTCAGAAGAGAACTTGTTTCCTTAATCGCAAAGTTGTCCTGCACTTTGGATCCGGCTTTGTCTTATCTTGCTACCAACTATCTGGATCGGTTCCTAGCCAGCCAAGGGATTTCGGAACCTAAGTCATGGGTCCTCAGGCTCATTGCTGTCTCTTGCATTTCTCTAGCTGTCAAGATGATGAAAACTGAATGCTTCGATGTTCAGGATCTTTTGAATCAAAGTGATGGGGGCATGATCTTTGAGACACAAACAGTGCGAAGAATGGAAGCACTTATCTTGGGAGCATTACAATGGAGAATGCGGTCGATCACTCCATTCTCTTTCATCCCTTTCTTCATTGCCTTGATGGGGATCAAAGGCTCACCAACGGGGACGGTTCTGAAAAACCGTGCTTCTGAAATCATATTCATGTCACAAAGAGAGATAAGGCTTTGGGAGTTCAAGCCATCTATGATTGCTGCATCTGCTCTTTTGTGTGCTTCTCATGAGTTGTTTCCTTTTCAATATCCGTCCTTCTTAAAAGCAATAACCGAGTCTACATATGAAAGCGTGGAGCAGTGCTACAAAGTGATACAAGACATAGCCATAGAGGAGGAGTACGAGTCTGCGTTGAATGGGGTTTCAAGGTCAGACACACCGATTAATGTGTTGGACCATCATTTTCTGAGTTCAGAAAGTGAAAAAACCAACGGAATCACCGTTGCTGATTCTCCTCTGAGACAAGAGAGGGACCTCAAAAGAAGGAAAATCACTCCATGCGGGAACAATCCAACGATCCACAACTCTTGA 924 0.4416 MEFDLENPLENLHSDAVSFLFLVESDHTPSQNHSHTLKPGDLDISVRRELVSLIAKLSCTLDPALSYLATNYLDRFLASQGISEPKSWVLRLIAVSCISLAVKMMKTECFDVQDLLNQSDGGMIFETQTVRRMEALILGALQWRMRSITPFSFIPFFIALMGIKGSPTGTVLKNRASEIIFMSQREIRLWEFKPSMIAASALLCASHELFPFQYPSFLKAITESTYESVEQCYKVIQDIAIEEEYESALNGVSRSDTPINVLDHHFLSSESEKTNGITVADSPLRQERDLKRRKITPCGNNPTIHNS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01512 307 CDD CYCLIN_AtCycD-like_rpt2 148 236 - -
Viun11g01512 307 SUPERFAMILY Cyclin-like 13 145 IPR036915 -
Viun11g01512 307 Pfam Cyclin, N-terminal domain 19 145 IPR006671 -
Viun11g01512 307 SUPERFAMILY Cyclin-like 129 241 IPR036915 -
Viun11g01512 307 FunFam D6-type cyclin 30 142 - -
Viun11g01512 307 SMART cyclin_7 48 139 IPR013763 -
Viun11g01512 307 Pfam Cyclin, C-terminal domain 148 244 IPR004367 -
Viun11g01512 307 Gene3D - 23 234 - -
Viun11g01512 307 Gene3D - 30 146 - -
Viun11g01512 307 SMART Cyclin_C_2 148 258 IPR004367 -
Viun11g01512 307 PANTHER CYCLINS 45 247 IPR039361 -
Viun11g01512 307 FunFam D6-type cyclin 143 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01512 Viun-Chr11 31279668 31282325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01512 1 292 Core Cell Cycle Gene Families AT4G03270 42.628 3.24e-67 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01512 K18812 - gmx:100820404 492.656