Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01475 ATGAGAAACTTTTTTCTTTCAGCCAACCAGTTTACTGGAAGTATTCCAACCTCTTTATCCACTTTGGCTGGACTGACAGACATGTCTCTTAACAACAATTTCTTAACTGGAGAAATACCAGATGCTTTTCAGTCACTTACGCAATTGATCAATCTTGATTTATCTCATAATAATTTGAGTGGGGCATTGCCTTCTTCTATGGATAACTTGTCATCTCTGACCACCCTACGCTTACAAAACAATCAATTATCTGGGACACTTGATGTCTTACAAGACCTTCCTCTGAAAGATTTGAATATTGAGAACAACCAGTTTGCTGGCCCAATACCTCCAAAGTTGCTAAGCATCCCAGCCTTCAGGCAAGCTGGAAACCCATTTAATGTTAATGGTACAACAACAACTCCGGCTTCTTCACCTCGCTCCCCAGCAATAGCACCACCAGGAACTCCTATTTCTGGGACACCACCGGGAACTCCCATCTCTGGGTCACCACCATCTTCTGGCCGTGTACCTACTAAACAGGCCGATGGACCAGCTGCAGCAAATGAATCGCACACTGGGAAATCCAAAAATTCCACAAAAAGGGTGGTTTGGATATCTATTGGTAGTGTGTTGGGGTTCATTATTTTGTTACTAGGATTCATTCTCTTTATTCCAAGATGCAGCAGAAGAGAACGGGATGGCAGAAGGTCCAAGCATCAAATTGGTGCGTATGGGGCTGAAAGGGAAATGCCCAGGGGTAATGGGAGTTCAGTCCAACCACCTAGTCAAATTGAAAAAGTACCAGTAGGGGATGTTCCCAGGCCAAAAGAGGAACGTCAGGTAGAGAATAGGACAGTCTGGGCTAATCCAAGGCCAAAAGAAGGTCGTCAGGCAGAGATCAGGACAGTCTCGGCTATTCCAAATCCACATACAAATCCACGGAGTGAGCAAGAGAAGGATGTGCAAAGAATGGCAACAATACCAAACCCAGGCGATCATGAGATAGATATTAGTACACTAGAAGTATATTCAATGCCTCCTCCCCCTCCACCCCCACCACCTCCTCCACCACCACCTCCACCTCCACCTCCTACTACTGAGAAGGTGACTGTTGAGCCAGCCACATCGCGCAGAGCAACAAATGTCACTACGCACAAAAAAAGTTCAGTTCCTACTTTTACAAAGTTTTTTGGTATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGAAAATCTTATAGGAGGAGGCATGCTTGGTAATGTGTATAGAGCTGAGCTTCCTAATGGCAAGTTTCTTGCTGTAAAGAAACTGGACAAGAGAGCTTCAGATAACCAGAAGGATGAGGAATTTCTTGAATTGATTAATAGTATTGACAGAATTAGGCATGCAAATGTTGTTGAGCTTGTTGGATACTGTTCCGAGCATGGTCAGAGGCTTCTTATATATGAGTACTGCAGTAATGGGTCACTGTATGATGCGCTCCACTCAGACGATGACTTCAAAACAACACTCTCATGGAATACTCGAATTCGAATAGCTCTTGGGGCAGCCAGAGCCTTAGAATATCTGCATGAGTTATGTCAGCCACCTGTAGTACACAGAAATTTGAAGTCTGCCAATATTCTACTTGATGATGATCTATCCGTGCGGGTCTCTGATTGTGGTTTAGCTCCATTAATAGCGTCAGGAGCAGTCAGTCAGCTCTCGGGGAACCTGTTAACTGCTTATGGCTATGGAGCTCCTGAATTTGAGTCTGGAATATACACATATCAAAGTGACGTGTACAGCTTTGGAGTGATCATGTTAGAACTTTTGACTGGCCGTCGGTCCCACGACAGGACACGTCCCCGGGGTGAGCAATTTCTGGCCAGATGGGCAGTTCCCCAACTTCATGATATTGAAGCCTTATCGAACATGGTTGATCCTGCTTTGAATGGAAATTACCCAGCAAAATCATTGTCAAATTTTGCAGACATTATCTCTAGATGCCTTCAGTCCGAGCCAGAATTTAGGCCAGCAATGTCCGAGGTTGTCTTATACTTACTAAATATGATAAAGAAGGAGTCTCAGCAAGGTGAATCAAATGAAAAATGA 2082 0.4404 MRNFFLSANQFTGSIPTSLSTLAGLTDMSLNNNFLTGEIPDAFQSLTQLINLDLSHNNLSGALPSSMDNLSSLTTLRLQNNQLSGTLDVLQDLPLKDLNIENNQFAGPIPPKLLSIPAFRQAGNPFNVNGTTTTPASSPRSPAIAPPGTPISGTPPGTPISGSPPSSGRVPTKQADGPAAANESHTGKSKNSTKRVVWISIGSVLGFIILLLGFILFIPRCSRRERDGRRSKHQIGAYGAEREMPRGNGSSVQPPSQIEKVPVGDVPRPKEERQVENRTVWANPRPKEGRQAEIRTVSAIPNPHTNPRSEQEKDVQRMATIPNPGDHEIDISTLEVYSMPPPPPPPPPPPPPPPPPPPTTEKVTVEPATSRRATNVTTHKKSSVPTFTKFFGIASLQQYTNSFSQENLIGGGMLGNVYRAELPNGKFLAVKKLDKRASDNQKDEEFLELINSIDRIRHANVVELVGYCSEHGQRLLIYEYCSNGSLYDALHSDDDFKTTLSWNTRIRIALGAARALEYLHELCQPPVVHRNLKSANILLDDDLSVRVSDCGLAPLIASGAVSQLSGNLLTAYGYGAPEFESGIYTYQSDVYSFGVIMLELLTGRRSHDRTRPRGEQFLARWAVPQLHDIEALSNMVDPALNGNYPAKSLSNFADIISRCLQSEPEFRPAMSEVVLYLLNMIKKESQQGESNEK 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01475 693 ProSiteProfiles Leucine-rich repeat profile. 72 94 IPR001611 GO:0005515
Viun11g01475 693 MobiDBLite consensus disorder prediction 241 381 - -
Viun11g01475 693 MobiDBLite consensus disorder prediction 264 278 - -
Viun11g01475 693 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 368 480 - -
Viun11g01475 693 MobiDBLite consensus disorder prediction 337 362 - -
Viun11g01475 693 SUPERFAMILY Protein kinase-like (PK-like) 381 677 IPR011009 -
Viun11g01475 693 MobiDBLite consensus disorder prediction 125 193 - -
Viun11g01475 693 Gene3D Phosphorylase Kinase; domain 1 363 480 - -
Viun11g01475 693 Pfam Protein tyrosine and serine/threonine kinase 406 675 IPR001245 GO:0004672|GO:0006468
Viun11g01475 693 Pfam Leucine rich repeat 24 83 IPR001611 GO:0005515
Viun11g01475 693 SUPERFAMILY L domain-like 4 117 - -
Viun11g01475 693 MobiDBLite consensus disorder prediction 363 381 - -
Viun11g01475 693 SUPERFAMILY Formin homology 2 domain (FH2 domain) 347 357 - -
Viun11g01475 693 Gene3D Ribonuclease Inhibitor 1 133 IPR032675 -
Viun11g01475 693 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 481 691 - -
Viun11g01475 693 MobiDBLite consensus disorder prediction 140 162 - -
Viun11g01475 693 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 2 687 IPR046959 -
Viun11g01475 693 ProSiteProfiles Protein kinase domain profile. 403 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01475 693 MobiDBLite consensus disorder prediction 125 139 - -
Viun11g01475 693 Gene3D Transferase(Phosphotransferase) domain 1 481 693 - -
Viun11g01475 693 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01475 Viun-Chr11 30938265 30944973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01475 1 684 Strubbelig Receptor Gene Family AT4G03390 59.281 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Viun11g01475 PK_Tyr_Ser-Thr 2.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01475 - - mtr:25492087 915.605