Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01472 ATGGATTGGAAGAGATCTGCTTTGGAGTGCCAGAGAGTAAAGATCTGTGGACAAGTTCTGTTGGGATTCTTGTTGATCTGCACAATTCACACTTCAAGTGCTGTCACCGATCCCACTGATGTTGCTGCAATTAATAGCTTATATGCTGCACTGGGATCCCCTGTTCTTCCTGGGTGGGTTGCTAGTGGAGGAGATCCATGTGGAGAAGGGTGGCAAGGCATTCTGTGTAATGGGTCATTCATACAAAAAATAGTTCTAAATGGTGCAAATTTGGGAGGAGAACTGGGAGATAAACTATCAACTTTTGTTTCAATCTCAGTAATTGATCTAAGCAACAACAACATTGGAGGAAATATTCCATCCAGTTTGCCAGTTACCATGAGAAACTTTTTTCTTTCAGCCAACCAGTTTACTGGAAGTATTCCAACCTCTTTATCCACTTTGGCTGGACTGACAGACATGTCTCTTAACAACAATTTCTTAACTGGAGAAATACCAGATGCTTTTCAGTCACTTACGCAATTGATCAATCTTGATTTATCTCATAATAATTTGAGTGGGGCATTGCCTTCTTCTATGGATAACTTGTCATCTCTGACCACCCTACGCTTACAAAACAATCAATTATCTGGGACACTTGATGTCTTACAAGACCTTCCTCTGAAAGATTTGAATATTGAGAACAACCAGTTTGCTGGCCCAATACCTCCAAAGTTGCTAAGCATCCCAGCCTTCAGGCAAGCTGGAAACCCATTTAATGTTAATGGTACAACAACAACTCCGGCTTCTTCACCTCGCTCCCCAGCAATAGCACCACCAGGAACTCCTATTTCTGGGACACCACCGGGAACTCCCATCTCTGGGTCACCACCATCTTCTGGCCGTGTACCTACTAAACAGGCCGATGGACCAGCTGCAGCAAATGAATCGCACACTGGGAAATCCAAAAATTCCACAAAAAGGGTGGTTTGGATATCTATTGGTAGTGTGTTGGGGTTCATTATTTTGTTACTAGGATTCATTCTCTTTATTCCAAGATGCAGCAGAAGAGAACGGGATGGCAGAAGGTCCAAGCATCAAATTGGTGCGTATGGGGCTGAAAGGGAAATGCCCAGGGGTAATGGGAGTTCAGTCCAACCACCTAGTCAAATTGAAAAAGTACCAGTAGGGGATGTTCCCAGGCCAAAAGAGGAACGTCAGGTAGAGAATAGGACAGTCTGGGCTAATCCAAGGCCAAAAGAAGGTCGTCAGGCAGAGATCAGGACAGTCTCGGCTATTCCAAATCCACATACAAATCCACGGAGTGAGCAAGAGAAGGATGTGCAAAGAATGGCAACAATACCAAACCCAGGCGATCATGAGATAGATATTAGTACACTAGAAGTATATTCAATGCCTCCTCCCCCTCCACCCCCACCACCTCCTCCACCACCACCTCCACCTCCACCTCCTACTACTGAGAAGGTGACTGTTGAGCCAGCCACATCGCGCAGAGCAACAAATGTCACTACGCACAAAAAAAGTTCAGTTCCTACTTTTACAAAGTTTTTTGGTATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGAAAATCTTATAGGAGGAGGCATGCTTGGTAATGTGTATAGAGCTGAGCTTCCTAATGGCAAGTTTCTTGCTGTAAAGAAACTGGACAAGAGAGCTTCAGATAACCAGAAGGATGAGGAATTTCTTGAATTGATTAATAGTATTGACAGAATTAGGCATGCAAATGTTGTTGAGCTTGTTGGATACTGTTCCGAGCATGGTCAGAGGCTTCTTATATATGAGTACTGCAGTAATGGGTCACTGTATGATGCGCTCCACTCAGACGATGACTTCAAAACAACACTCTCATGGAATACTCGAATTCGAATAGCTCTTGGGGCAGCCAGAGCCTTAGAATATCTGCATGAGTTATGTCAGCCACCTGTAGTACACAGAAATTTGAAGTCTGCCAATATTCTACTTGATGATGATCTATCCGTGCGGGTCTCTGATTGTGGTTTAGCTCCATTAATAGCGTCAGGAGCAGTCAGTCAGCTCTCGGGGAACCTGTTAACTGCTTATGGCTATGGAGCTCCTGAATTTGAGTCTGGAATATACACATATCAAAGTGACGTGTACAGCTTTGGAGTGATCATGTTAGAACTTTTGACTGGCCGTCGGTCCCACGACAGGACACGTCCCCGGGGTGAGCAATTTCTGGCCAGATGGGCAGTTCCCCAACTTCATGATATTGAAGCCTTATCGAACATGGTTGATCCTGCTTTGAATGGAAATTACCCAGCAAAATCATTGTCAAATTTTGCAGACATTATCTCTAGATGCCTTCAGTCCGAGCCAGAATTTAGGCCAGCAATGTCCGAGGTTGTCTTATACTTACTAAATATGATAAAGAAGGAGTCTCAGCAAGGTGAATCAAATGAAAAATGA 2460 0.4386 MDWKRSALECQRVKICGQVLLGFLLICTIHTSSAVTDPTDVAAINSLYAALGSPVLPGWVASGGDPCGEGWQGILCNGSFIQKIVLNGANLGGELGDKLSTFVSISVIDLSNNNIGGNIPSSLPVTMRNFFLSANQFTGSIPTSLSTLAGLTDMSLNNNFLTGEIPDAFQSLTQLINLDLSHNNLSGALPSSMDNLSSLTTLRLQNNQLSGTLDVLQDLPLKDLNIENNQFAGPIPPKLLSIPAFRQAGNPFNVNGTTTTPASSPRSPAIAPPGTPISGTPPGTPISGSPPSSGRVPTKQADGPAAANESHTGKSKNSTKRVVWISIGSVLGFIILLLGFILFIPRCSRRERDGRRSKHQIGAYGAEREMPRGNGSSVQPPSQIEKVPVGDVPRPKEERQVENRTVWANPRPKEGRQAEIRTVSAIPNPHTNPRSEQEKDVQRMATIPNPGDHEIDISTLEVYSMPPPPPPPPPPPPPPPPPPPTTEKVTVEPATSRRATNVTTHKKSSVPTFTKFFGIASLQQYTNSFSQENLIGGGMLGNVYRAELPNGKFLAVKKLDKRASDNQKDEEFLELINSIDRIRHANVVELVGYCSEHGQRLLIYEYCSNGSLYDALHSDDDFKTTLSWNTRIRIALGAARALEYLHELCQPPVVHRNLKSANILLDDDLSVRVSDCGLAPLIASGAVSQLSGNLLTAYGYGAPEFESGIYTYQSDVYSFGVIMLELLTGRRSHDRTRPRGEQFLARWAVPQLHDIEALSNMVDPALNGNYPAKSLSNFADIISRCLQSEPEFRPAMSEVVLYLLNMIKKESQQGESNEK 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01472 819 SUPERFAMILY Protein kinase-like (PK-like) 507 803 IPR011009 -
Viun11g01472 819 SUPERFAMILY L domain-like 36 242 - -
Viun11g01472 819 Gene3D Phosphorylase Kinase; domain 1 489 606 - -
Viun11g01472 819 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 76 800 - -
Viun11g01472 819 ProSiteProfiles Leucine-rich repeat profile. 198 220 IPR001611 GO:0005515
Viun11g01472 819 MobiDBLite consensus disorder prediction 266 288 - -
Viun11g01472 819 MobiDBLite consensus disorder prediction 489 507 - -
Viun11g01472 819 Gene3D Transferase(Phosphotransferase) domain 1 607 819 - -
Viun11g01472 819 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Viun11g01472 819 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 607 817 - -
Viun11g01472 819 MobiDBLite consensus disorder prediction 251 265 - -
Viun11g01472 819 SUPERFAMILY Formin homology 2 domain (FH2 domain) 473 478 - -
Viun11g01472 819 ProSiteProfiles Protein kinase domain profile. 529 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01472 819 Gene3D Ribonuclease Inhibitor 38 258 IPR032675 -
Viun11g01472 819 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 37 264 - -
Viun11g01472 819 MobiDBLite consensus disorder prediction 367 507 - -
Viun11g01472 819 MobiDBLite consensus disorder prediction 251 319 - -
Viun11g01472 819 MobiDBLite consensus disorder prediction 390 404 - -
Viun11g01472 819 Pfam Protein tyrosine and serine/threonine kinase 532 801 IPR001245 GO:0004672|GO:0006468
Viun11g01472 819 Pfam Leucine rich repeat 150 209 IPR001611 GO:0005515
Viun11g01472 819 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 494 606 - -
Viun11g01472 819 MobiDBLite consensus disorder prediction 463 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01472 Viun-Chr11 30938071 30944973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01472 32 810 Strubbelig Receptor Gene Family AT4G03390 60.633 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Viun11g01472 PK_Tyr_Ser-Thr 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01472 - - mtr:25492087 1109.75