Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01466 ATGGGTTGTTGTGTCTCAACAAGCAGTAGAAGTACTTGTAGCAGCAAGAGCAATGGAGACACGGTCTCTCCGTCTTGTTTAGAAATTGGATTCTGTGGGCAGAAGAGAACAAGACGAACATTCTCTGATCATGTTATTTCTCTCCACCATTTACCATCCTTACCTAGCAGAATTTTCTCTAATGGAAAGAGTCGAGGTTCGTGCATCTTTACGCAGCAGGGTCGCAAGGGTATTAATCAGGATGCCATGATTGTGTGGGAAGATTTCATGTCAGAAGACATGATCTTTTGTGGTGTTTTTGATGGGCATGGTCCTCACGGTCATCTTGTTGCACGCAAAGTTAGGGATGCTTTACCTGTTAAACTGCTATCATTTTTGCATTCTTCTGAATCAAAGCGAAATGGGTCTGGTAAAACTTGCTTCAAAGGGAATGTAAAATCTGATAGTGTAGAAATTGAGAAGGATTGCTCAACAGAGGATAAAATGAACTCTATGTGGAGAGAAGCTTTCATGAAAGCATACAAGGCTATGGACAAAGAGCTCAGGTCTCATCCAAATTTGGATTGCTTCTGCAGTGGGAGCACTGCTGTGACTATAGTGAAGCAGGGTTCCAATCTGTTCATGGGCTATATTGGAGATTCTCGGGCAATCATGGGATCCAAGGATAGCAATGATTCAATGGTGGCTATTCAGTTGACTGTGGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAAAGAATTAAGCGCTGCAAAGGTAGGGTATTTGCTTTGCAAGATGAGCCTGAAGTGCCTAGGGTGTGGTTGCCCTTTGATGATGCACCAGGATTAGCAATGGCCAGAGCCTTTGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCTATCCCCGAGTTTTCCCATCGGCAACTTACTGACAGAGATCAATTCATTGTTCTTGCATCAGACGGGGTGTGGGATGTTTTAAGCAATGAGGAGGTAGTTGAGATAGTATCTTCAGCACCAACACGATCATCAGCAGCAAGGATTCTGGTAGATTCTGCTGCCAGGGAGTGGAAACTGAAATACCCTACTTCAAAGATGGATGACTGTGCTGTAGTATGCTTATTTTTGGATGGGAAAATGGACTCAGAATCTGATTATGATGAACAAGGCTTTTCTTCTGCGACCATCCAGAGCAACCATTCGGGTAACCCCATTGAGTCAGATGATGGACAAAAGTCTGAGCCATCACTGCAGAGGAACTTCACTGTAAGATCCTCAGAAGAAAATGAGACTAATGGAAAAATAACTGTTGATGTCGAAGATGGAACATCATCAGCTGATGATCAAAACTGGTCAGGTTTGGAAGGGGTCACTCGTGTAAACTCACTTGTCCAACTTCCTAGATTTTCTGAGGAAAGGCCAAACTCTTGA 1413 0.4345 MGCCVSTSSRSTCSSKSNGDTVSPSCLEIGFCGQKRTRRTFSDHVISLHHLPSLPSRIFSNGKSRGSCIFTQQGRKGINQDAMIVWEDFMSEDMIFCGVFDGHGPHGHLVARKVRDALPVKLLSFLHSSESKRNGSGKTCFKGNVKSDSVEIEKDCSTEDKMNSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRQLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENETNGKITVDVEDGTSSADDQNWSGLEGVTRVNSLVQLPRFSEERPNS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01466 470 MobiDBLite consensus disorder prediction 1 21 - -
Viun11g01466 470 CDD PP2Cc 65 370 IPR001932 -
Viun11g01466 470 SMART PP2C_4 50 368 IPR001932 -
Viun11g01466 470 PANTHER PROTEIN PHOSPHATASE 65 368 IPR015655 GO:0004722|GO:0006470
Viun11g01466 470 FunFam probable protein phosphatase 2C 52 57 373 - -
Viun11g01466 470 SUPERFAMILY PP2C-like 57 372 IPR036457 -
Viun11g01466 470 MobiDBLite consensus disorder prediction 380 447 - -
Viun11g01466 470 Pfam Protein phosphatase 2C 128 347 IPR001932 -
Viun11g01466 470 Gene3D - 59 372 IPR036457 -
Viun11g01466 470 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Viun11g01466 470 MobiDBLite consensus disorder prediction 381 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01466 Viun-Chr11 30811863 30815810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01466 1 470 PP2C-type Phosphatase Gene Family AT1G03590 71.130 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01466 - - gmx:100813306 895.575