Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01447 ATGTTTTTCTTTGAAGTGCTTTCTTCTCAATTGTTTCTAGTCATTGTTTGGTCATTTTCAACTATTATTACATCTCTTGTTAGTGTTGTGAGTTTACCAAACAATGAAAGTGTTCCAGCACTGTTTGTGTTCGGAGACTCTATAGTAGATACAGGTAACAATAACTACATTAACACCATAGCCAAATGTAATTTTCGACCATATGGTAAAGATTTTGGTGGAGGAAATCAACCAACTGGGAGGTTCAGCAATGGTTTAACCCCTTCAGATTTCATTGCTGCAAAATTTGAAGTTAAGAAGCTTTTGCCACCGTACCTTGATCCAAATTTGAAACGTGAAGATCTCCTCAGAGGTGTAAGCTTTGCATCTGGTGCTAGTGGATATGATCCTCTAACTTCTGAACTAGCATTAGTGTTATCATTATCAGATCAACGGGACAAATTCAGGGAATACATAAAAAAGATACAGAACATGGTTGGAGAAACCACAACGACAACAATGATATCGAAAAGCATATACATCTTATGCACAGGAAGCAATGACATTACCAATACTTACTCTTTTAGGCGGCTGAAATATAATATTTCAACTTATACAGACTTCATGGCTTCACAAGCTACAAAGTTCTTAAAAGAACTTTATGGACTTGGAGCTAGAAGAATTGGAATAGTTGGTTTGCCAATTCTAGGGTGTGTGCCCTTTCAAAAAACAATGAGAGGAGGATTTAAGAGAGCATGTTCAGATTCTGAAAATCAAGCTGCGATATTGTTCAACAAAAAGCTATCATCCCAAATAGATATTCTTGGGAAAAATTTTCCTGAAGCTAGACTTGTCTACCTTGATATTTACAACCCATTATCGGATATGATTCAAAACCCCTCTAAATATGGTTTTGAAGTAGCAGATAAAGGATGTTGTGGCACAGGATATTTTGAAGTAGGCTTTATGTGTAACGCTCTTTCCAAGATATGTTCAAACAGGTCAAACTATATATTTTGGGATAGTGTCCATCCTACGGAAAGGGCCTATAATATACTTTGTTCAGAGGCGCTTGACAAAAATATCAACAAATTCTTCTGA 1080 0.362 MFFFEVLSSQLFLVIVWSFSTIITSLVSVVSLPNNESVPALFVFGDSIVDTGNNNYINTIAKCNFRPYGKDFGGGNQPTGRFSNGLTPSDFIAAKFEVKKLLPPYLDPNLKREDLLRGVSFASGASGYDPLTSELALVLSLSDQRDKFREYIKKIQNMVGETTTTTMISKSIYILCTGSNDITNTYSFRRLKYNISTYTDFMASQATKFLKELYGLGARRIGIVGLPILGCVPFQKTMRGGFKRACSDSENQAAILFNKKLSSQIDILGKNFPEARLVYLDIYNPLSDMIQNPSKYGFEVADKGCCGTGYFEVGFMCNALSKICSNRSNYIFWDSVHPTERAYNILCSEALDKNINKFF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01447 359 CDD SGNH_plant_lipase_like 39 354 IPR035669 -
Viun11g01447 359 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 41 52 IPR008265 GO:0006629|GO:0016298
Viun11g01447 359 SUPERFAMILY SGNH hydrolase 171 350 - -
Viun11g01447 359 PANTHER GDSL ESTERASE/LIPASE EXL3 20 348 - -
Viun11g01447 359 Pfam GDSL-like Lipase/Acylhydrolase 41 346 IPR001087 GO:0016788
Viun11g01447 359 Gene3D SGNH hydrolase 29 355 IPR036514 -
Viun11g01447 359 FunFam GDSL esterase/lipase APG 30 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01447 Viun-Chr11 30618059 30624945 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01447 35 355 Pollen Coat Proteome AT1G75910 39.697 5.78e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01447 - - gmx:100808475 542.347