Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun11g01428 | ATGATAGATGTAGAGATCTATAATCTTTGTATAGAAGAAAGTTATGATCCTGCTCACTTTTATGGACGTGTGGAAGCATACCCCTTTGATGATAACCATGTGCCATCTCTTCAAATGATCAGAGATTTCTGTGAAAGTGTGGATTCATGGCTGTCAAGTGACCCCAAAAATATTGTTGTTATTCATTGCATGTATTATGCAGCAGGAAAAGGTAGAACTGGATTAATGGTGTGTGCATACTTAACTTATTGTGGCATGTCAGCAGATGAGGCTCTTCAACTGTATGCGGATAGACGAACAACCAATAATGAAGGAGTATCAATACCAAGTCGTGGCATATTGGGATAG | 348 | 0.3879 | MIDVEIYNLCIEESYDPAHFYGRVEAYPFDDNHVPSLQMIRDFCESVDSWLSSDPKNIVVIHCMYYAAGKGRTGLMVCAYLTYCGMSADEALQLYADRRTTNNEGVSIPSRGILG | 115 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun11g01428 | 115 | Gene3D | Protein tyrosine phosphatase superfamily | 3 | 112 | IPR029021 | - | |
| Viun11g01428 | 115 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 6 | 100 | IPR029021 | - | |
| Viun11g01428 | 115 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 1 | 115 | IPR029023 | - | |
| Viun11g01428 | 115 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 5 | 110 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Viun11g01428 | Viun-Chr11 | 30514242 | 30515650 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Viun11g01428 | 5 | 111 | Protein tyrosine phosphatase (PTP) family | AT5G39400 | 76.636 | 4.57e-55 | 174 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun11g01428 | K01110 | - | vun:114169833 | 244.202 |