Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01426 ATGTTTTTCTGTGAAGTACCTTTTTCTCAATTGTTTTTAGCCATTCTTTGGTCATTTTCAACTATTATTATATCTCTTGTTAGTGTTGTGAGTTTACCAAACAATGAAAGTGTTCCAGCACTGTTTGTGTTTGGGGACTCCATCTTAGATACAGGTAACAATGACTACATTGAGACCTTCTTCAAATGTAATTTTCCACCATATGGTGAAGATTTTGGTGGAGGAAATCAACCGACTGGGAGGTTCAGCAATGGTTTAATCCCTTCAGACTTCCTTGCTGCAGAACTAAAAATCAAGAAGCTTTTGCCTCCGTATCTTGATCCAAATTTGAAACGTGAAGATCTTCTCACAGGTGTAAGCTTTGCATCTGGTGCTAGTGGATATGATCCTCTAACTAATAATATAGCATTAGTGCTATCATTATCAGATCAACTAGACAAATTCAAGGAATACAAAACCAAGATACAAGACATGGTTGGAGAAAACACAACAACAACAATTATATCGAAAAGCATATACATCTTGTCCTCAGGAAGCAATGATATTACCAATACTTTCTTTTTATTACCATTTAGGCGACTACAGTATAATATTTCAACTTACACAGATTTAATGGTTTCAAAAGCTAAAGAATTCTTGGAAGATCTTTATGAACTTGGAGCTAGAAGGATTGGAATAGTTGGTTTGCCAAATTTAGGGTGTCTGCCCTCTCAAAGAACACTGAGAGGAGGATTTAACAGGACATGTTCAGATCTTGAAAACCAGGCTGCAATGCTCTTCAACAACAAGTTATCATCTCAAATAGATATCCTTGGAAAAAATTTTACTGATGCTAAACTTGTCTACCTTGATATTTACAAAATATTATCGGATATGGTTCAAAATGCCACTAAATATGGTTTTGAAGTAGCAGATAAAGGATGTTGTGGCACAGGATATTTTGAAGTAGGCGGTCTGTGTAATTTTCTTTCCCAGATATGTTCAAACAGGTCAAACTACATATTTTGGGACAGTTTCCATCCTACGGAAAAGGCATATAATATAATTTCTTCTGAGGTGTTTGATAGAAACATCAATAAATTCTTCTAA 1089 0.3508 MFFCEVPFSQLFLAILWSFSTIIISLVSVVSLPNNESVPALFVFGDSILDTGNNDYIETFFKCNFPPYGEDFGGGNQPTGRFSNGLIPSDFLAAELKIKKLLPPYLDPNLKREDLLTGVSFASGASGYDPLTNNIALVLSLSDQLDKFKEYKTKIQDMVGENTTTTIISKSIYILSSGSNDITNTFFLLPFRRLQYNISTYTDLMVSKAKEFLEDLYELGARRIGIVGLPNLGCLPSQRTLRGGFNRTCSDLENQAAMLFNNKLSSQIDILGKNFTDAKLVYLDIYKILSDMVQNATKYGFEVADKGCCGTGYFEVGGLCNFLSQICSNRSNYIFWDSFHPTEKAYNIISSEVFDRNINKFF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01426 362 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 41 52 IPR008265 GO:0006629|GO:0016298
Viun11g01426 362 Pfam GDSL-like Lipase/Acylhydrolase 41 352 IPR001087 GO:0016788
Viun11g01426 362 FunFam GDSL esterase/lipase APG 30 358 - -
Viun11g01426 362 Gene3D SGNH hydrolase 29 358 IPR036514 -
Viun11g01426 362 PANTHER GDSL ESTERASE/LIPASE EXL3 23 352 - -
Viun11g01426 362 SUPERFAMILY SGNH hydrolase 172 354 - -
Viun11g01426 362 CDD SGNH_plant_lipase_like 39 355 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01426 Viun-Chr11 30488950 30490541 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01426 15 353 Pollen Coat Proteome AT1G75910 40.580 1.89e-76 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01426 - - gmx:100808475 492.656