Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01422 ATGTTTTTCTTTGAAGTGCTTTCTTCTCAATTGTTTTTAGTCATTCTTTGGTCATTTTCAACTATTATTACATCTCTTGTTAGTGTTGTGAGTTTACCAAACAATGAAAGTGTTCCAGCACTGTTTGTGTTCGGAGACTCTATAGTAGATACAGGTAACAATAACTACATTAACACCATAGCCAAATGTAATTTTCGACCATATGGTAAAGATTTTGGTGCAGGAAATCAACCAACTGGGAGGTTCAGTAATGGTTTAACCCCTTCAGACTTCATTGCTGCAAAATTTGAAATCAAGAAGCTTTTGCCACCGTATCTTGATCCAACTTTGCAACGTAAAGGTCTTCTCACAGGTGTAAGCTTTGCATCTGGTGCCAGTGGATATGATCCTCAAACTAATAAAATAGCATCAGTGCTATCATTATCAGACCAACTAGACAAATTCAGGGAATACAAAACCAAGATACACGACATGGTTGGAGAAAACACAACAACAACAATTATATCGAAAAGTGTATACATTTTGTGCACAGGAAACAATGATATTACCAATACTTTCTTTACATTACCATTTAGGCGACTAAAGTATAGTATTTCAACTTACACAGATTTCATGGTTTCAGAAGCTAAAAAATTCTTGCAAGATCTTCATGGACTTGGAGCTAGAAGGATTGGAATACTTGGTTTGCCAAAATTAGGGTGTGTGCCCTCTCAAAGAACACTAAGAGGAGGATTTAACAGGACATGTTCAGAACCTGAAAACCAGGCTGCAATGCTCTTTAACAAGAAGCTATCATCCCAAATAGATATTCTTGGGAAAGATTTTCCTGATGCTAGACTTGTCTACCTTGATATTTACAACCCATTATCCGATATGATTCAAAATCCCACTAAATATGGTTTTGAAGTAGCAAATAAAGGATGTTGTGGCACAGGAAATCTTGAAGCAAGCGTTCTATGTAACCCTCTAACTCTGGAGATATGTTCAAACAGGTCAAACTACATATTTTTTGACAGTTTTCATCCTACAGAAAAGGCCTATAATATACTTTGTTCTGAGGTGCTTGACAAAAATATCAACAAATTCTTCTGA 1092 0.3599 MFFFEVLSSQLFLVILWSFSTIITSLVSVVSLPNNESVPALFVFGDSIVDTGNNNYINTIAKCNFRPYGKDFGAGNQPTGRFSNGLTPSDFIAAKFEIKKLLPPYLDPTLQRKGLLTGVSFASGASGYDPQTNKIASVLSLSDQLDKFREYKTKIHDMVGENTTTTIISKSVYILCTGNNDITNTFFTLPFRRLKYSISTYTDFMVSEAKKFLQDLHGLGARRIGILGLPKLGCVPSQRTLRGGFNRTCSEPENQAAMLFNKKLSSQIDILGKDFPDARLVYLDIYNPLSDMIQNPTKYGFEVANKGCCGTGNLEASVLCNPLTLEICSNRSNYIFFDSFHPTEKAYNILCSEVLDKNINKFF 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01422 363 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 41 52 IPR008265 GO:0006629|GO:0016298
Viun11g01422 363 SUPERFAMILY SGNH hydrolase 41 356 - -
Viun11g01422 363 CDD SGNH_plant_lipase_like 39 358 IPR035669 -
Viun11g01422 363 Pfam GDSL-like Lipase/Acylhydrolase 41 351 IPR001087 GO:0016788
Viun11g01422 363 PANTHER GDSL ESTERASE/LIPASE EXL3 20 353 - -
Viun11g01422 363 Gene3D SGNH hydrolase 29 359 IPR036514 -
Viun11g01422 363 FunFam GDSL esterase/lipase APG 30 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01422 Viun-Chr11 30457060 30459442 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01422 35 356 Pollen Coat Proteome AT1G75910 38.838 1.90e-71 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01422 - - gmx:100808475 530.406