Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01377 ATGAGTTCCACCGTGCTCTCGTCTACGATAAGAAACATTACCAAAATTCTGAGAGAAAACTTCAGGGGCAATGTAGCCCAAAGTTCCCCTGGCTGCAGTCATCGAGAAAAGGATCCCCGCACTGATGTATCAGAGAAAAGGATTGTTGGAATGTTCCATGAGCTCCTTCACCTTACACTTCATAAACAAACTGAGCGCAAGAATGTGAGCAACTTGCGTAGACCCCTGTCACTGCCCCGAAGATGTGACTATATGGCCTCGGTCATGACCGGTGGAGAAAGTTTTGAAGAATATTATGAAACTGAGGATGATGAAAAGGAAAATTATTCCGATCTAAATGGAAAATATTCCATGCAAAATTGCATAGATATCCTCAAAGAAACATATAACCATATTGGTACCGTGGAATTTGGGTTTGCTATAGAATTGATTAAAAATCCTCAAAATAGGATCATAGTTATGAACTTACGAGATACAATTCATGGTTTGGTTGCTTGGATTCATTATGTATATGATATATCGTTGAATCAAATGTTTTATAAAGCAATGGCTCATGCTGGTGCAATAGAAGTGAAAAAAGTACTCAAAGTATATAAAGGATTTGAAGGGTTGTCAACACTGGTTGATGTAGGAGGTGGAGTAGGAGAGACCCTGAAACTCATTCTCTCTGCATACCCTTCAATTAAAGGGATTAACTTTGATTTGCCTCACATGATTCAAGATGCACCTCCTCATCCAGGTGTGGAGCATGTGGGAGGAGATATGTTTGAAAGTGTTCCAAATGGGGATGCCATTTTGGTAAAGTCTATATGTCACAACTGGGCAGATGAAGATTGTACAAAACTTTTAAGAAACTGTCACAAAGCTTTGCCACCACATGGGAAAGTGATTGTTTTGGATTATATAATTCCAGAGGTTCCCAATTCAAGTGATGCATCTAAACATAGTACTATTGTGGACAATCACATGCTTTTAGCACATGGAGGGAGGGAAAGAACTGAGATTGAATTTGAGAGCTTGTGCAAGAGTTCTGGTTTTTCCAAGTTTCATGTTGCATGTAGTGACATATCGGCTACTGTGGGAGTGATGGAGTTCTATAAGTAG 1104 0.3958 MSSTVLSSTIRNITKILRENFRGNVAQSSPGCSHREKDPRTDVSEKRIVGMFHELLHLTLHKQTERKNVSNLRRPLSLPRRCDYMASVMTGGESFEEYYETEDDEKENYSDLNGKYSMQNCIDILKETYNHIGTVEFGFAIELIKNPQNRIIVMNLRDTIHGLVAWIHYVYDISLNQMFYKAMAHAGAIEVKKVLKVYKGFEGLSTLVDVGGGVGETLKLILSAYPSIKGINFDLPHMIQDAPPHPGVEHVGGDMFESVPNGDAILVKSICHNWADEDCTKLLRNCHKALPPHGKVIVLDYIIPEVPNSSDASKHSTIVDNHMLLAHGGRERTEIEFESLCKSSGFSKFHVACSDISATVGVMEFYK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01377 367 Gene3D Vaccinia Virus protein VP39 176 354 IPR029063 -
Viun11g01377 367 PANTHER O-METHYLTRANSFERASE 159 355 IPR016461 GO:0008168
Viun11g01377 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 170 355 IPR029063 -
Viun11g01377 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 367 IPR016461 GO:0008168
Viun11g01377 367 Gene3D - 159 194 IPR036388 -
Viun11g01377 367 Pfam O-methyltransferase domain 159 347 IPR001077 GO:0008171
Viun11g01377 367 Pfam Plant organelle RNA recognition domain 29 82 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01377 Viun-Chr11 29704260 29710654 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01377 161 353 Monolignol Biosynthesis Gene Families AT5G54160 55.897 1.47e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01377 - - vun:114170340 725.702