Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01374 ATGGCTTCAACTTCAGCATCTTGTTCCTTTACCATTAGAGTGGTATTCCTCATTTTTGTGCACCTGTCATGTTTGGCAAAAAACCTCAATGCAAAGCACAGTCACAACCATAGCAAGCCTCAACACACTGAGAATCCTCCCTTGAATCCAAGACTTCACATGGCCTTTCTTGGCCTCCAAGCATGGAAGCAAGTGATCTACTCAGACCCAAATAACTTCACAGCCAATTGGGTAGGTCCTTCGGTTTGCAACTACACAGGTGTGTACTGTGCTCCCTCAGTAGATGATCCTAAAGTGAGAGTTGTGGCTGGTATTGACCTTAACTTTGGAGACATAGCAGGGTTCCTACCCGATGAAATAGGTCTTCTGTCAGACCTTGCACTCCTTCACATTAGTAACAACCGCTTCTGTGGCATTTTGCCAATGTCCTTAACCAATCTCACTCTACTCTATGAGTTTGATATTAGCAGCAACAGGTTTGTCGGTCCCTTTCCTTTGGTCGTGCTTTCCCTTCCCATGCTCGCCTACCTTGACCTCCGCTACAATGAATTTGAAGGGCCATTGCCTCCTCAACTTTTCAACAAAACCTTTGATGCTGTTTTCCTGAACAACAACCGCTTCAGCAGTTCTATACCTCCAAACTTGGGCAAAAACTCAGCTTCTGTCTTGGTCTTTGCCAACAACAAATTTGGAGGGTGTCTCCCAGAAAGCATAGTGAACTTTGCTGACACTTTGGAGGAGCTTGTGCTGATCAATACTAGCTTGTCAGGTTGTTTGCCACAGCAAGTGGGGTTTCTCTACAAACTGAGAGTGTTGGATGTGAGTTTCAACAGCATTGTTGGCCCCATTCCTTATAGCCTTGCAGGATTGTCTCACTTGGAGCAACTAAACCTGGGACACAACATGATGAGTGGCACTGTCCCTATGGGGGTTTGTGAGTTGCCAAACTTGGCAAACTTCACTTTCTCTTACAACTTCTTCTGTGAGGAAGAGGGTATCTGTCAGAACTTGACATCAAAGAGAATAGTGTTTGATGACAGAAGGAACTGTTTGCCAGAGAAGCCACTGCAGAGGAGCCAAAAGGAATGCAGTGCCATACTTGAACACCCAGTTGATTGCTCTGAGCTTTGCTGTGTTGTTGGGAGCAATGTCTCTGCTGGTTCAGTGGCTGTTCCACCTGCTGCTGTTCCCTCAGCAATGCCTGTATCTGCTCCTCTTCTTGCACCAAGCCACCCTTAA 1239 0.4617 MASTSASCSFTIRVVFLIFVHLSCLAKNLNAKHSHNHSKPQHTENPPLNPRLHMAFLGLQAWKQVIYSDPNNFTANWVGPSVCNYTGVYCAPSVDDPKVRVVAGIDLNFGDIAGFLPDEIGLLSDLALLHISNNRFCGILPMSLTNLTLLYEFDISSNRFVGPFPLVVLSLPMLAYLDLRYNEFEGPLPPQLFNKTFDAVFLNNNRFSSSIPPNLGKNSASVLVFANNKFGGCLPESIVNFADTLEELVLINTSLSGCLPQQVGFLYKLRVLDVSFNSIVGPIPYSLAGLSHLEQLNLGHNMMSGTVPMGVCELPNLANFTFSYNFFCEEEGICQNLTSKRIVFDDRRNCLPEKPLQRSQKECSAILEHPVDCSELCCVVGSNVSAGSVAVPPAAVPSAMPVSAPLLAPSHP 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01374 412 Gene3D Ribonuclease Inhibitor 57 220 IPR032675 -
Viun11g01374 412 FunFam Leucine-rich repeat extensin-like protein 1 56 217 - -
Viun11g01374 412 Gene3D Ribonuclease Inhibitor 221 363 IPR032675 -
Viun11g01374 412 SUPERFAMILY L domain-like 63 342 - -
Viun11g01374 412 Pfam Leucine rich repeat 244 302 IPR001611 GO:0005515
Viun11g01374 412 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 22 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01374 Viun-Chr11 29668277 29670148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01374 49 378 Leucine-rich Repeat extension Gene Families AT3G24480 54.381 3.78e-134 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01374 - - gmx:100782629 719.539