LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun11g01372	ATGGCTGATGGACTGGAGCATCCATCAGTTGTTCAGAAGCTAGCTGGACAGTCTTACCTTGTCTCCAGGCTTAGCCCCAACTTTCACTCCAGGAATTATTCTGCAACTGGTATTAACCTTAATGGAGGACTGCACACATCTGGATTGGCTGCCTTGTCATCTGTATCTCCAATTACTGCACATGCTCCAGCAGAGAAAGGACCAGATGCTTTTATGGTGGATTTTCTGATGGGCGGAGTATCTGCTGCTGTATCAAAGACAGCTGCTGCTCCAATTGAGAGAGTCAAATTGCTCATTCAAAATCAGGATGAGATGATCAAAAGTGGTCGGTTATCTGAACCATACAAGGGAATTGGTGATTGTTTTGCTCGAACCATGAAGGATGAGGGTGTGATTGCTCTTTGGAGAGGCAATACTGCCAATGTTATCAGATACTTCCCCACTCAGGCTCTGAACTTTGCTTTTAAGGATTACTTCAAGAGGCTTTTTAACTTTAAGAAGGACAAAGATGGCTACTGGAAGTGGTTTGCTGGAAATCTGGCATCTGGTGGGGCTGCTGGGGCTTCTTCTCTCTTATTTGTCTATTCTTTGGATTATGCCCGTACACGTTTGGCTAATGATTCAAAGGCTGCAAAGAAGGGTGGTGAGAGGCAGTTTAATGGTCTGATTGATGTATACAGGAAAACCATTAAGTCTGATGGCATTGCTGGCCTTTACCGTGGTTTCAACATTTCATGTGTTGGAATTATAGTGTACCGTGGTCTTTACTTTGGAATGTATGATTCTCTGAAACCAGTTGTATTGGTTGGTGGGTTGCAGGATAGTTTCTTTGCTAGTTTCCTTTTGGGGTGGGGAATCACAATTGGTGCTGGTTTGGCTTCCTATCCCATTGACACTGTGCGTAGAAGGATGATGATGACTTCTGGAGAAGCTGTGAAGTATAAGAGTTCTTTGCATGCATTTCAAACAATCGTGGCAAAAGAAGGTACCAAGTCACTCTTCAAAGGCGCTGGTGCAAACATATTGCGTGCTGTTGCAGGTGCTGGTGTGCTTGCTGGTTATGATAAGTTGCAGCTTATTATGTTCGGAAAGAAATACGGGTCTGGCGGGGGCTAA	1116	0.4435	MADGLEHPSVVQKLAGQSYLVSRLSPNFHSRNYSATGINLNGGLHTSGLAALSSVSPITAHAPAEKGPDAFMVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFARTMKDEGVIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDSKAAKKGGERQFNGLIDVYRKTIKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLVGGLQDSFFASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQTIVAKEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLIMFGKKYGSGGG	371

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun11g01372	371	Pfam	Mitochondrial carrier protein	173	266	IPR018108	-
	Viun11g01372	371	Pfam	Mitochondrial carrier protein	275	361	IPR018108	-
	Viun11g01372	371	Pfam	Mitochondrial carrier protein	71	166	IPR018108	-
	Viun11g01372	371	PANTHER	ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED	67	370	IPR002113	GO:0005471\|GO:0005743\|GO:0140021\|GO:1990544
	Viun11g01372	371	SUPERFAMILY	Mitochondrial carrier	71	356	IPR023395	-
	Viun11g01372	371	PRINTS	Mitochondrial carrier protein signature	189	207	IPR002067	GO:0055085
	Viun11g01372	371	PRINTS	Mitochondrial carrier protein signature	137	157	IPR002067	GO:0055085
	Viun11g01372	371	PRINTS	Mitochondrial carrier protein signature	239	257	IPR002067	GO:0055085
	Viun11g01372	371	PRINTS	Mitochondrial carrier protein signature	74	87	IPR002067	GO:0055085
	Viun11g01372	371	PRINTS	Mitochondrial carrier protein signature	283	305	IPR002067	GO:0055085

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun11g01372	Viun-Chr11	29621340	29624969	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun11g01372	3	362	Antiporters	AT4G28390	81.301	0.0	583

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun11g01372	K05863		-	gmx:100818408	677.167

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