Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01371 ATGGCTTATGGACCGGAGCATCCATCAGTTGTTGAAAAGCTAGCTGGACAGTCTTACCTTGTCTCGAGTCTCAGCCCCAACTTTCAGTCCATGAATTATTCTGCAATTACTGTGAATGCTCCAACTTTCATGGTGAATTTTCTGATGAGCGGAGTATATTCTGCTGTATCAAAGACAGCTATTGCTCCGATTGAAAGAGTCAAATTGCTTAATCAAAATCAGAATGAAATGATCAAAACTGGTCGGTTATCTCAACCATACAGGGGAATTGGTAATTGTTTTGCTCGAACCATCAAGAATGAGGGTGTCATTACTCTATGGAGAGGCAATAGTGTCAATGCTATCAGATACTTCCGTGCTCAGGATCGTTGGTTTGCTTGTTTCCTTGTGGTAGGGGGATTCACAATTAGTAGTTTGGCTTCCTATCCCATTGACACTGTGCGTAGAAGGATGATGATGACTTCTGGAGAGGCTGTGAAGTATAAGAGCTCTTTGCATGCATTCCAAACAATCGTCGCAAAAAAAGGTACCAAGTCACTCTTTAAAGGTTTTGATGCACATATATTGTGTGGTGCTGCAGGTGTTGTTGTGGTTGCTTCTTTTGATAAGTTGCAACTTGCTTTGTTCGAAAAGGAATATGGGTATTGTGGCGAATTCCCTCTTTAG 666 0.4159 MAYGPEHPSVVEKLAGQSYLVSSLSPNFQSMNYSAITVNAPTFMVNFLMSGVYSAVSKTAIAPIERVKLLNQNQNEMIKTGRLSQPYRGIGNCFARTIKNEGVITLWRGNSVNAIRYFRAQDRWFACFLVVGGFTISSLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQTIVAKKGTKSLFKGFDAHILCGAAGVVVVASFDKLQLALFEKEYGYCGEFPL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01371 221 Pfam Mitochondrial carrier protein 135 205 IPR018108 -
Viun11g01371 221 Pfam Mitochondrial carrier protein 42 127 IPR018108 -
Viun11g01371 221 Gene3D Mitochondrial carrier domain 127 206 IPR023395 -
Viun11g01371 221 PRINTS Adenine nucleotide translocator signature 87 108 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun11g01371 221 PRINTS Adenine nucleotide translocator signature 43 55 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun11g01371 221 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 129 214 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Viun11g01371 221 Gene3D Mitochondrial carrier domain 37 126 IPR023395 -
Viun11g01371 221 SUPERFAMILY Mitochondrial carrier 41 128 IPR023395 -
Viun11g01371 221 ProSiteProfiles Solute carrier (Solcar) repeat profile. 41 134 IPR018108 -
Viun11g01371 221 SUPERFAMILY Mitochondrial carrier 135 202 IPR023395 -
Viun11g01371 221 PRINTS Mitochondrial carrier protein signature 46 59 IPR002067 GO:0055085
Viun11g01371 221 PRINTS Mitochondrial carrier protein signature 59 73 IPR002067 GO:0055085
Viun11g01371 221 PRINTS Mitochondrial carrier protein signature 109 129 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01371 Viun-Chr11 29602274 29608978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01371 73 206 Antiporters AT4G28390 45.806 5.74e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01371 K05863 - gmx:100818408 179.104