Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01365 ATGACAGGAAGAGACATCCTCAATATGATGAAGGTGAAAGCAGGGTTTGGAACATCAACACCAGAGACAGGGAAAGGAAAAGGGAAAATATCAAAACACATTACACATGGCTTCCACTTGATGAAGGGAAAATCTGGACATCCCATGGAAGATTATTTAGTTTCAGAATTCAAGCAAGAAAAAGACAGAGAATTAGGTTTGTTTGCAATATTTGATGGCCACTTAGGCCATGATGTTGCAAGCTATTTGCAGAACCATCTTTTTCACAACATCTTGAAACAGCATGACTTTTGGACTGAGACAGAAAACGCAGTGAAAAGGGCTTATATTGAAACTGATGAGAAAATATTGGAACAAGCACTTGAGTTGGGAAGAGGAGGGTCAACAGCAGTAACTGCAATACTGATAGATGGTCAGAAGCTTGTAGTAGGAAACGTTGGTGACTCAAGAGCTGTTATTTGTGAGCATGGAAAGGCTAGGCAACTATCTGTAGATCATGAACCAAGCAAGGAAAAGAAATCTATTGAGAGACGTGGAGGGTTCGTATCAAACATTCCAGGAGATGTCCCTCGAGTAGATGGACAGTTGGCAGTAGCAAGAGCTTTTGGTGATAGAAGCTTGAAGATGCATCTTAGTTCAGAACCTGATGTGTTTGTAGAGGAAGTACTTCATCATACAGAGTTTCTTATTCTGGCTAGTGATGGAATATGGAAGGTAATGTCAAACCAAGAAGCAGTGGATTCCATTAGGCAAATAAAGGATGCTCAAGCTGCAGCAAAGCACTTAATAGAAGAGGCAGTTTCCAAGAAAAGTAAAGATGACATATCTTGCATAGTTGTGAGGTTCCAATGA 852 0.4038 MTGRDILNMMKVKAGFGTSTPETGKGKGKISKHITHGFHLMKGKSGHPMEDYLVSEFKQEKDRELGLFAIFDGHLGHDVASYLQNHLFHNILKQHDFWTETENAVKRAYIETDEKILEQALELGRGGSTAVTAILIDGQKLVVGNVGDSRAVICEHGKARQLSVDHEPSKEKKSIERRGGFVSNIPGDVPRVDGQLAVARAFGDRSLKMHLSSEPDVFVEEVLHHTEFLILASDGIWKVMSNQEAVDSIRQIKDAQAAAKHLIEEAVSKKSKDDISCIVVRFQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01365 283 SUPERFAMILY PP2C-like 32 282 IPR036457 -
Viun11g01365 283 Gene3D - 30 283 IPR036457 -
Viun11g01365 283 SMART PP2C_SIG_2 49 282 IPR001932 -
Viun11g01365 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
Viun11g01365 283 SMART PP2C_4 24 280 IPR001932 -
Viun11g01365 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Viun11g01365 283 FunFam Probable protein phosphatase 2C 39 25 283 - -
Viun11g01365 283 CDD PP2Cc 36 282 IPR001932 -
Viun11g01365 283 PANTHER PROTEIN PHOSPHATASE 31 282 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01365 Viun-Chr11 29520074 29522785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01365 24 283 PP2C-type Phosphatase Gene Family AT4G28400 74.615 8.66e-145 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01365 K17506 - gmx:100819846 513.457